Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0900 ATGAGTAGTAGTGGAGGAGAATTCATGGTAACAGTGAGGAGGAAAGAAGTAGTGGCAGCTATGCTACCAATGCAGAAGCACTGGCTACCACTCTCTAACCTGGACTTGCTTTTACCCCCCATTAATGTTGGGGTGTTTTTCTGTTATAAGAAGCCACGTGGAAGTGCCAGCGGAGGTGATGACTTCACATTTGGGTCCATGGTTAGGGTTCTGAAAGAGGCCATGGCCCAAGCCCTGGTGCCCTATTATGCCTTTGCTGGAGAAGTCTTGTCTAACTCATTGGGGGAAGCTGAGCTTCTTTGCAACAACCGTGGGGTGGATTTCTTGGAGGCTTATGCGGATGTAAAACTACAAGACCTCAACTTGTATAACCCTGACGAAAGCATTGAAGGCAAGCTTGCCCCTACGAGGAAGCATGGCGTCCTCTCAGTCCAGGTAACTGAGCTCAAATGTGGCGGAATTGTGGTGGCCTGTACATTTGATCACCGGATAGCAGACGCATATTCTACCAATATGTTCCTAGTTTCATGGGCTGAGATGGCTCAGTCCAAGCCCTTATCTGTAATACCATCTTTCCGGCGTTCTCTCCTCAACCCTCGACATCCAGGCTCCTATGCTCCGTCCCTTGACCACATGTACGTTCCCATCTCAGCCTTACCTCCGCCCAAAGTTCCACAACCTGGTGCTGATCCTCTCATAAGCCGTCTGTACTATGTCACTGCCGAGAAGCTCAGTCTACTCCAAACACTAGCCACCAGCAAGAGTAGCTCCTACAAGAGGACCAAACTAGAGTCTCTTAGTGCCTTTTTGTGGAAGATGGTGGCCAAAAGTGCTCACATGGAAAATGCAAACCAAAAAATATGCAAGATGAGTGTCGTGGTGGATGGAAGAAAGAGGTTAAGCAGTGGAGATGAGGATAGGACAACAGCGATGGCCTCATACTTTGGAAATGTGCTGTCCTTCCCCTTTGGTGAGAAGACAGTAAATGACCTCAAAGAAAAACCACTGAGTTGGGTGGGAGATGAAGTTCATGATTTCCTGGAAGCGGCTATGACAAAGGAACATTTCTTGGGGCTGATAGACTGGGTGGAGGCTCATCGCCCAGAGCCGGCTGCACTGAATATGTGCTGCAGTGGCAATAGCGACGGGCCAGGATTTATGGTGTCATCAGGGCAGAGGTTCCCGGTGACAAAGGTGGATTTCGGGTGGGGTAAGCCGGCCCTAGGGTCATATCATTTTCCATGGGGTGCGGAAGTTGGGTACGTGATGCCAATGCCAAGCCCCACTGTAGATGATGACTGGGTGGTGTACATGCACCTCTTGAAAGCCCAGATTGAGTTGATTGAGACTGAGGCTGCTCATATCTTTAGACCCTTAACAGCCGACCATCTCAATTTATTTGATTAG 1407 0.4932 MSSSGGEFMVTVRRKEVVAAMLPMQKHWLPLSNLDLLLPPINVGVFFCYKKPRGSASGGDDFTFGSMVRVLKEAMAQALVPYYAFAGEVLSNSLGEAELLCNNRGVDFLEAYADVKLQDLNLYNPDESIEGKLAPTRKHGVLSVQVTELKCGGIVVACTFDHRIADAYSTNMFLVSWAEMAQSKPLSVIPSFRRSLLNPRHPGSYAPSLDHMYVPISALPPPKVPQPGADPLISRLYYVTAEKLSLLQTLATSKSSSYKRTKLESLSAFLWKMVAKSAHMENANQKICKMSVVVDGRKRLSSGDEDRTTAMASYFGNVLSFPFGEKTVNDLKEKPLSWVGDEVHDFLEAAMTKEHFLGLIDWVEAHRPEPAALNMCCSGNSDGPGFMVSSGQRFPVTKVDFGWGKPALGSYHFPWGAEVGYVMPMPSPTVDDDWVVYMHLLKAQIELIETEAAHIFRPLTADHLNLFD* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0900 468 Pfam Transferase family 8 453 - -
Vvi9g0900 468 Gene3D - 218 450 IPR023213 -
Vvi9g0900 468 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 427 - -
Vvi9g0900 468 Gene3D - 7 213 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0900 Vvi-Chr9 11837249 11838748 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0900 10 449 Monolignol Biosynthesis Gene Families AT5G48930 27.655 7.16e-44 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0900 - - vvi:100256573 945.651