Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0896 ATGGCAACAAATTTTATTAAATTGGGACTTTTGGGTGATCCTGAAAACTCTAGAGATATTATGAGCAAGGCAAAGACATACATGCAGCAAGGGGGATCTGAGAAAGCCATCTACAAAAAAGAAACACAAGGAATACACTTGTATGAGAGCTGTAACTATGGGTTACTGTTATTGAATCAATACCAACCAAGCAGAGTTTCTTGTTTCATGAGAAAAATCATGTCTGGATCAGATCATTCCTCTGGTTTTGATCAGCCAAGGTTGGTGGTCAAGAAGGTCTTGGCCAAGCCTCAATGTGAGGGTGAGGGTGCTGTTGTTAGGCGGAGCATTGGAAGGAGTGAATTGAAAAACCAGGATCCTTTTCTCAAGTTGGATGAGTTCACAGTTGCACCGCCTACTAATTTTCCAAATCATCCATACTGA 423 0.4113 MATNFIKLGLLGDPENSRDIMSKAKTYMQQGGSEKAIYKKETQGIHLYESCNYGLLLLNQYQPSRVSCFMRKIMSGSDHSSGFDQPRLVVKKVLAKPQCEGEGAVVRRSIGRSELKNQDPFLKLDEFTVAPPTNFPNHPY* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0896 140 Gene3D Jelly Rolls 97 140 IPR014710 -
Vvi9g0896 140 SUPERFAMILY RmlC-like cupins 87 140 IPR011051 -
Vvi9g0896 140 PANTHER PIRIN-RELATED 74 139 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0896 Vvi-Chr9 11802321 11803915 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0896 86 140 Calmodulin-binding Proteins AT3G59220 52.727 1.49e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0896 K06911 - vvi:100254895 165.236