Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0887 ATGAGTGTCGTGGTGGATGGAAGAAAGAGGTTAAGCAGTGGAGATGAGGATAGGACAACAGCGATGGCCTCATACTTTGGAAATGTGCTGTCCTTCCCCTTTGGTGAGAAGACAGTAAATGACCTCAAAGAAAAACCACTGAGTTGGGTGGGAGATGAAGTTCATGATTTCCTGGAAGCGGCTATGACAAAGGAACATTTCTTGGGGCTGATAGACTGGGTGGAGGCTCATCGCCCAGAGCCGGCTGCACTGAATATGTGCTGCAGTGGCAATAGCGACGGGCCAGGATTTATGGTGTCATCAGGGCAGAGGTTCCCGGTGACAAAGGTGGATTTCGGGTGGGGTAAGCCGGCCCTAGGGTCATATCATTTTCCATGGGGTGCGGAAGTTGGGTACGTGATGCCAATGCCAACCCCCACTGTAGATGATGACTGGGTGGTGTACATGCACCTCTTGAAAGCCCAGATTGAGTTGATTGAGACTGAGGCTGCTCATATCTTTAGACCCTTAACAGCCGACCATCTCAATTTGCTTAACGCAGATTAG 546 0.5037 MSVVVDGRKRLSSGDEDRTTAMASYFGNVLSFPFGEKTVNDLKEKPLSWVGDEVHDFLEAAMTKEHFLGLIDWVEAHRPEPAALNMCCSGNSDGPGFMVSSGQRFPVTKVDFGWGKPALGSYHFPWGAEVGYVMPMPTPTVDDDWVVYMHLLKAQIELIETEAAHIFRPLTADHLNLLNAD* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0887 181 Pfam Transferase family 2 164 - -
Vvi9g0887 181 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 138 - -
Vvi9g0887 181 Gene3D - 1 161 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0887 Vvi-Chr9 11654624 11655169 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0887 1 160 Monolignol Biosynthesis Gene Families AT5G48930 28.571 2.13e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0887 - - vvi:104880345 382.104