Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0881 ATGTCTGGATCAGATCATTCCTCTGGTTTTGATCAGCCAAGGTTGGTGGTCAAGAAGGTCTTGGCCAAGCCTCAACGTGAGGGTGAGGGTGTTGTTGTTAGGAGGAGCATTGGAATGAGTGAATTGAAAAACCTGGATCCTTTTCTCATGTTGGATGAGTTCACAGTTGCACCGCCTGCTAGTTTTCCAGATCATCCATACAGAGGCTTTGAGATTGTTACATACATGCTGCAGGGAGCTTTCACTCATCAAGATTTTGCAGGGCATAAGGGCACAATCCGAACAAGGATGTGCAGTGGATGA 303 0.4653 MSGSDHSSGFDQPRLVVKKVLAKPQREGEGVVVRRSIGMSELKNLDPFLMLDEFTVAPPASFPDHPYRGFEIVTYMLQGAFTHQDFAGHKGTIRTRMCSG* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0881 100 Gene3D Jelly Rolls 24 99 IPR014710 -
Vvi9g0881 100 PANTHER PIRIN-RELATED 1 95 IPR012093 -
Vvi9g0881 100 Pfam Pirin 32 95 IPR003829 -
Vvi9g0881 100 SUPERFAMILY RmlC-like cupins 14 95 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0881 Vvi-Chr9 11547695 11547997 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0881 13 94 Calmodulin-binding Proteins AT3G59220 60.976 8.96e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0881 K06911 - vvi:100254895 185.267