Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0865 ATGGAATTAGTGACTTCTGTGCTGGGTTCACTACTTGCAGACGTAGGTAGACATCTTTATGGCTTCATTTCTTCTGGAATTAGGAATTCCAGGCTGTATTTTAATGATCTGGAAAAAGAGATGAAGCTCCTGACAGACTTGAGAAATAATGTGGAAATGGAGGGTGAATTGGTTACAATCATTGAAGCAACTGAGTGGCTTAAACAGGTTGAAGGGATTGAGCATGAGGTGAGTTTGATTCAGGAAGCTGTAGCAGCCAACCATGAAAAATGTTGTGGGGGTTTCTTGAATTGCTGTCTGCACCGTAGGCAACTGGCGAAAGGGTTCAAGGAGGTGAAAAGACTGGAGGAAGAGGGCTTCAGCCTGCTAGCTGCAAATCGAATACCAAAAAGTGCTGAGTACATCCCAACAGCACCAATTGAAGACCAAGCAACAGCAACACAAAATTTAGCCAAAATAATGAATCTGCTGAACGATGATGGGGTTAGGAGGATTGGTGTTTGGGGCATGGGGGGAGTAGGTAAAACTACTCTCATCAAGAACTTGAACAACAAGCTCAGGAATGCTTCGTCCGCGCAACCTTTCAGGATTGTCATATGGGTTACAGTGTCGCAGGAGCTGGACTTGAAAAAGATACAAACACAAATTGCTGAGAGGTTGGATTTGGGGCTGATTATGAATGGAAGCAATAGGACTGTGGCTGGTAGGTTGTTCCAGAGACTGGAGCAGGAGAAATTTCTCCTCATTCTGGATGATGTTTGGGAGGGAATTGATTTGGATGCTTTGGGAGTTCCTCAGCCTGAAGTTCACGCGGGTTGTAAGATCATATTGACATCTAGACGTTTTGATGTTTGTCGGGAAATGAAGACAGACATTGAAGTTAAAATGGATGTCCTCAACCATGAAGAAGCTTGGAAATTGTTTTGCCAAAATGCAGGGGAGGTAGCCACATTAAAGCACATCAAACCATTAGCAGCAGGAGTGGCTGGAGAATGTGCTGGGTTACCCTTGGCAATAATCATCATGGGAACATCTATGAGGGGGAAGACAAGGGTAGAGCTATGGAAGGATGCATTGAACGAGCTTCGAAGATCAGTACCATACAACATCGAAGGGATCGAGGATAAGGTTTACAAGCCCTTGAAGTGGAGTTATGACTCATTGCAAGGTGAGAGCATCAAGTCTTGTTTCCTCTATTGCTCTTTATTTCCTGAGGATTTCTCAATCCAAATAAGTGAGCTTGTACAATGTTGGCTTGCCGAAGGTTTCATAAATGAGCAACAAAACTGTGAGGATGTAAAAAACAGGGGGATTGCTTTAATTGAAAATCTGAAGGACTGTTGTTTGTTGGAACATGGTGACCATAAGGACACCGTGAAAATGCATGATGTAGTTCGTGACGTTGCTAAATGGATTGCATCCACCTTGGAGGATGGAAGTAAATCCCTTGTTGAATCAGGGGTTGGACTTGGTCAAGTTTCAGAGGTTGAGTTATCAAAGCCTCTCAAGAGAGTTTCTTTCATGTTTAACAAAATAACAAGGCTGCCTGAACATGCTATAGGGTGTTCAGAGGCATCCACTTTATTACTACAAGGTAATCTCCCCCTGCAGGAAGTTCCTGAAGGATTTCTCTTGGGATTTCAAGCACTGAGGGTCTTGAACATGAGTGGAACCCAGATCCAGAGGCTGCCTTCTTCCATTCTGCAGCTTGCTCAACTTAGAGCTCTTCTTTTGAAGGGGTGCCTTCGTCTGGTAGAATTACCCCCACTGGGAAGCCTCTGTAGATTACAAGTACTTGACTGCAGTGCTACTCTGATCAATGAATTGCCAGAAGGGATGGAGCAATTGAAGAAGTTAAGGGAGCTAAACCTATCACGCACTATCCACCTGAAAACCATTCAAGCTGAAGTTATAGCTGGGTTGTCTAGTTTAGAGGTTCTAGACATGACAGATAGTGAATATAAATGGGGTGTGAAGGGAAAGGTGGAAGAGGGACAAGCATCATTTGAGGAGCTTGAATGCCTTGAGAAATTGATTGATTTATCCATTAGGCTGGAAAGTACTTCATGTCCTGCTCTGGAAGATGTCAACTGGATGAACAAATTGAACCGATTCCTATTCCATATGGGTTCAACCACTCATGAAATTCACAAAGAAACTGAACATGACGGAAGACAAGTAATTCTCAGGGGCCTCGATCTCTCGGGAAAGCAGATTGGATGGTCAATCACCAATGCAAGTTCTCTGCTCTTGGATCGTTGCAAGGGATTAGACCATCTGCTAGAGGCCATAACCATTAAGAGCATGAAGAGTGCTGTTGGTTGCTTCTCTTGTTTGAAGGCACTTACTATTATGAATTCTGGCAGCAGGTTACGGCCAACAGGAGGATATGGTGCTCGTTGCGACCTATTACCAAATCTAGAGGAAATTCATCTCTGTGGTCTCACAAGGCTGGTAACCATTTCTGAACTAACTAGTCAGCTTGGACTAAGATTCTCAAAGCTAAGAGTAATGGAAGTGACCTGGTGTCCCAAACTAAAATACCTTCTTTCTTATGGTGGTTTCATCCGAACATTAAAAAATCTGGAAGAAATCAAGGTAAGAAGCTGCAACAATTTGGATGAGCTCTTTATTCCTAGTTCAAGGCGGACTTCTGCCCCAGAACCTGTTCTTCCCAAGCTACGAGTAATGGAACTGGACAATCTTCCCAAGTTGACATCCCTTTTCAGAGAGGAGTCATTGCCACAGCTGGAGAAACTTGTAGTGACTGAGTGCAATCTTCTGAAGAAGCTACCTATCACCCTCCAAAGCGCATGTTCCATGAAAGAAATAAAAGGAGAAGTTGAATGGTGGAATGAGTTGGAGTGGGCTGATGATGCTATCCGTTTGAGTCTGCAGCATCATTTCAATTCTTAG 2916 0.4359 MELVTSVLGSLLADVGRHLYGFISSGIRNSRLYFNDLEKEMKLLTDLRNNVEMEGELVTIIEATEWLKQVEGIEHEVSLIQEAVAANHEKCCGGFLNCCLHRRQLAKGFKEVKRLEEEGFSLLAANRIPKSAEYIPTAPIEDQATATQNLAKIMNLLNDDGVRRIGVWGMGGVGKTTLIKNLNNKLRNASSAQPFRIVIWVTVSQELDLKKIQTQIAERLDLGLIMNGSNRTVAGRLFQRLEQEKFLLILDDVWEGIDLDALGVPQPEVHAGCKIILTSRRFDVCREMKTDIEVKMDVLNHEEAWKLFCQNAGEVATLKHIKPLAAGVAGECAGLPLAIIIMGTSMRGKTRVELWKDALNELRRSVPYNIEGIEDKVYKPLKWSYDSLQGESIKSCFLYCSLFPEDFSIQISELVQCWLAEGFINEQQNCEDVKNRGIALIENLKDCCLLEHGDHKDTVKMHDVVRDVAKWIASTLEDGSKSLVESGVGLGQVSEVELSKPLKRVSFMFNKITRLPEHAIGCSEASTLLLQGNLPLQEVPEGFLLGFQALRVLNMSGTQIQRLPSSILQLAQLRALLLKGCLRLVELPPLGSLCRLQVLDCSATLINELPEGMEQLKKLRELNLSRTIHLKTIQAEVIAGLSSLEVLDMTDSEYKWGVKGKVEEGQASFEELECLEKLIDLSIRLESTSCPALEDVNWMNKLNRFLFHMGSTTHEIHKETEHDGRQVILRGLDLSGKQIGWSITNASSLLLDRCKGLDHLLEAITIKSMKSAVGCFSCLKALTIMNSGSRLRPTGGYGARCDLLPNLEEIHLCGLTRLVTISELTSQLGLRFSKLRVMEVTWCPKLKYLLSYGGFIRTLKNLEEIKVRSCNNLDELFIPSSRRTSAPEPVLPKLRVMELDNLPKLTSLFREESLPQLEKLVVTECNLLKKLPITLQSACSMKEIKGEVEWWNELEWADDAIRLSLQHHFNS* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0865 971 Pfam NB-ARC domain 149 386 IPR002182 GO:0043531
Vvi9g0865 971 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 20 932 - -
Vvi9g0865 971 Pfam Leucine rich repeat 526 581 IPR001611 GO:0005515
Vvi9g0865 971 Gene3D - 123 295 IPR027417 -
Vvi9g0865 971 FunFam Probable disease resistance protein At1g63360 385 470 - -
Vvi9g0865 971 FunFam Probable disease resistance protein At1g61300 128 293 - -
Vvi9g0865 971 Gene3D - 385 471 IPR036388 -
Vvi9g0865 971 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 400 IPR027417 -
Vvi9g0865 971 Gene3D - 298 384 IPR042197 -
Vvi9g0865 971 PRINTS Disease resistance protein signature 164 179 - -
Vvi9g0865 971 PRINTS Disease resistance protein signature 614 630 - -
Vvi9g0865 971 PRINTS Disease resistance protein signature 240 254 - -
Vvi9g0865 971 PRINTS Disease resistance protein signature 332 346 - -
Vvi9g0865 971 SUPERFAMILY L domain-like 457 938 - -
Vvi9g0865 971 Gene3D Ribonuclease Inhibitor 480 719 IPR032675 -
Vvi9g0865 971 Gene3D Ribonuclease Inhibitor 724 948 IPR032675 -
Vvi9g0865 971 Coils Coil 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0865 Vvi-Chr9 11119562 11122477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0865 162 611 WRKY Transcription Factor Family AT5G45050 24.436 1.24e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0865 K13459 - vvi:100254285 1917.51