Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0863 ATGAGTGAATGGTTTCAACACCTCAGCTTCAATATAGTCCTAAAGATGATCGCAGGGAAGAAGTATTTCAATACTTCTGGCCATGGAAACGAGGAAGCAAGGCGGGCCATAGCAACAATTCAGGAATTCCTGTCTCTAGCGGGGGCCTTTGTTTTGTCGGATGCCATTCCAGGTGTAGAATGGATGGATTCACAAGGGTATTTGGGGTCGATGAAGCGGGTGGCGAAGGAAGTGGACTCTCTTGTGGGAGGTTGGGTGGAAGAACATGAGATGAGGCTCAACAGCGAGGGCAGCAAGAGGCAGGATTTAATTGATGTGATGCTATCGGTGCTTGAAGACACTTCCATGTTTGGCCATTCAAGGGAAACAGTCATCAAGGCAACAGTAATGACTCTCATGGTGGGAGGCACTGACACTGTGGCTACAACCTCCACATGGCTTCTGTCTGCATTATTAAACAATAAACATGCTTTGAAGCGTGCTCAAGAGGAGCTAGATCTAAAAGTTGGTAGAGGCAGGTGGGTGGAAGAATCGGATATTCCAAACCTGCATTACCTTCAAGCCGTTATCAAGGAAACCCTGAGGCTATACACAGCAGCTCCTCTATCTGTGCCACACGAAGCCATGGAAGACTGTCATGTTGCTGGCTACCACATTCCAAAAGGCACCCGCTTGTTCGTGAATGCGTGGAAGTTGCACCGTGACCCAAGTGTCTGGTCCGACCCTGAAGATTTTCAGCCCGAGAGGTTTCTGACAAGCCATGCAGATTTAGATGTTTTGGGGCAGCATTTTGAGCTCATCCCATTTGGTTCTGGTAGAAGATCTTGCCCAGGGATCACCATGGCCTTAAAATTGTTACACTTGGTGATTGGTCGGCTGCTTCAAGGGTTTGACTTATCGACACCATTGAACGCTCCGGTGGACATGAGAGAAGGCCTGAGTATTATCTTGGCTAAGGTGACTCCTCTGGAAGTCATGCTCACCCCACGCCTTCCTTCTCAATTCTATTAG 1011 0.4837 MSEWFQHLSFNIVLKMIAGKKYFNTSGHGNEEARRAIATIQEFLSLAGAFVLSDAIPGVEWMDSQGYLGSMKRVAKEVDSLVGGWVEEHEMRLNSEGSKRQDLIDVMLSVLEDTSMFGHSRETVIKATVMTLMVGGTDTVATTSTWLLSALLNNKHALKRAQEELDLKVGRGRWVEESDIPNLHYLQAVIKETLRLYTAAPLSVPHEAMEDCHVAGYHIPKGTRLFVNAWKLHRDPSVWSDPEDFQPERFLTSHADLDVLGQHFELIPFGSGRRSCPGITMALKLLHLVIGRLLQGFDLSTPLNAPVDMREGLSIILAKVTPLEVMLTPRLPSQFY* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0863 336 Gene3D Cytochrome P450 1 330 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0863 336 PRINTS P450 superfamily signature 188 199 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0863 336 PRINTS P450 superfamily signature 135 152 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0863 336 PRINTS P450 superfamily signature 267 276 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0863 336 PRINTS P450 superfamily signature 276 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0863 336 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 269 278 IPR017972 GO:0005506|GO:0016705
Vvi9g0863 336 PRINTS E-class P450 group I signature 124 141 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0863 336 PRINTS E-class P450 group I signature 228 252 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0863 336 PRINTS E-class P450 group I signature 266 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0863 336 PRINTS E-class P450 group I signature 144 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0863 336 PRINTS E-class P450 group I signature 8 26 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0863 336 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0863 336 PRINTS E-class P450 group I signature 276 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0863 336 FunFam Cytochrome P450 82C4 1 328 - -
Vvi9g0863 336 SUPERFAMILY Cytochrome P450 1 330 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0863 336 Pfam Cytochrome P450 1 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0863 336 PANTHER CYTOCHROME P450 82C3-RELATED 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0863 Vvi-Chr9 11098018 11101066 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0863 1 336 Cytochrome P450 AT4G31940 47.536 1.20e-115 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0863 - - vvi:100262820 666.766