Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0862 ATGGATACCCCTTCTCAGTTAGTAGCAATCTCAGGAATTCTGGGGTTGGTTTTGTTGTATGGTGTATGGAGAGTTATGACTCTTGCTGGGAAGAGCAAGGGCAGGTCAGCCCCAGAGCCATCTGGTGCCTGGCCATTTCTAGGTCACCTTCCTCTACTACGAGGCCAAACCCCAATATTCCGAACCCTTGGAGCCATGGCTGATAAGCACGGCCCCGTCTTCATGATCCGCCTTGGAGTGCACCGCGCACTTGTGGTGAGCAGTCGTGAGGCTGTTAAAGAATGCTTCACCACTAATGATAAGGTCTTTGCCTCACGCCCAAGTTCCAGTGCAGGAAAGCTCTTAGGATACAACTACGCTGGATTTGGTTTCGCCCCTTATGGAGCCCTTTGGCGTGAGATGCGCAAGCTGTCCATGATGGAAATCCTCTCAGCCCGTCGCCTCGATGCATTAAAGCATGTGCAGATTTCGGAATTGGATCTTTCCATTAAAGATTTATACTCACTTGGAAAAGGCAGCGACTGGGTCCATCCAGTAAAGGTAGTGATGAGTGAATGGTTTCAACACCTCAGCTTCAATATAGTCCTAAAGATGATCGCAGGGAAGAGGTATTTCAATACTTCTGGCCATGGAATCGAGGAAGCAAGGCGGGCCATAGCAACAATTCAGGAATTCCTGTCTCTATCGGGGGCCTTTGTTTTGTCGGATGCCATTCCAGGTGTAGAATGGATGGATTTACAAGGGTATTTGGGGTCGATGAAGCGGGTGGCGAAGGAAGTGGACTCTCTTGTGGGAGGTTGGGTGGAAGAACATGAGATTAGGCTCAACAGCGAGGGCAGCAGGATGCAGGATTTCATTGATGTGATGCTATCGGTGCTTGAAGACACTTCCATGTTTGGCCATTCAAGGGAAACAGTCATCAAGGCAACAATAGTGATTCTCATAGTGGGAGGCACTGAGACTGTGGCTACAACCTCCACATGGCTTCTGTCTGCATTATTAAACAATAAACATGCTTTGAAGCGTGCTCAAGAGGAGCTAGATCTAAAAGTTGGTAGAGGCAGGTGGGTGGAAGAATCGGATATTCCAAACCTGCTTTACCTTCAAGCCGTTATCAAGGAAACCCTGAGGCTATACACAGCAGCTCCTCTATCTGTGCCACACGAAGCCATGGAAGACTGTCATGTTGCTGGCTACCACATTCCAAAAGGCACCCGCTTGTTCGTGAATGCGTGGAAGTTGCACCGTGACCCAAGTGTCTGGTCCGACCCTGAAGATTTTCAGCCGGAAAGGTTTCTGACGAGCCATGCAGATTTAGATGTTTTGGGGCAGCATTTTGAGCTCATCCCATTTGGTTCTGGCAGAAGATCTTGCCCAGGGATCACCATGGCCTTAAAATTGTTACCCTTGGTGATTGGTCGGCTGCTTCAAGGGTTTGACTTGTCAACACCATTGAACGCTCCGGTGGACATGAGAGAAGGCCTGAGTATTACCTTGGCTAAGCTGACTCCTCTGGAAGTCATCCTCACCCCACGCCTTCCTTCTCAATTCTATTAG 1557 0.4913 MDTPSQLVAISGILGLVLLYGVWRVMTLAGKSKGRSAPEPSGAWPFLGHLPLLRGQTPIFRTLGAMADKHGPVFMIRLGVHRALVVSSREAVKECFTTNDKVFASRPSSSAGKLLGYNYAGFGFAPYGALWREMRKLSMMEILSARRLDALKHVQISELDLSIKDLYSLGKGSDWVHPVKVVMSEWFQHLSFNIVLKMIAGKRYFNTSGHGIEEARRAIATIQEFLSLSGAFVLSDAIPGVEWMDLQGYLGSMKRVAKEVDSLVGGWVEEHEIRLNSEGSRMQDFIDVMLSVLEDTSMFGHSRETVIKATIVILIVGGTETVATTSTWLLSALLNNKHALKRAQEELDLKVGRGRWVEESDIPNLLYLQAVIKETLRLYTAAPLSVPHEAMEDCHVAGYHIPKGTRLFVNAWKLHRDPSVWSDPEDFQPERFLTSHADLDVLGQHFELIPFGSGRRSCPGITMALKLLPLVIGRLLQGFDLSTPLNAPVDMREGLSITLAKLTPLEVILTPRLPSQFY* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0862 518 Gene3D Cytochrome P450 30 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0862 518 CDD CYP82 71 512 - -
Vvi9g0862 518 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0862 518 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0862 518 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0862 518 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0862 518 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0862 518 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0862 518 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0862 518 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0862 518 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0862 518 PANTHER CYTOCHROME P450 82C3-RELATED 14 518 - -
Vvi9g0862 518 Pfam Cytochrome P450 38 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0862 518 FunFam Cytochrome P450 82C4 28 510 - -
Vvi9g0862 518 SUPERFAMILY Cytochrome P450 38 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0862 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Vvi9g0862 518 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0862 518 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0862 518 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0862 Vvi-Chr9 11038532 11043816 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0862 37 518 Cytochrome P450 AT4G31940 50.407 7.77e-179 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0862 - K23136 vvi:100267972 1024.62