Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0859 ATGGAAGACTGTCATGTTGCTGGCTACCACATTCCAAAAGGCACCCGCTTGTTCGTGAATGCGTGGAAGTTGCACCGTGACCCCAGTGTCTGGTCCGACCCTGAAGATTTCCAACTGGAGAGGTTTCTGACAAGCCATGCAAATTTAGATGTTTTGGGGCAGCATTTTGAGCTCATCCCATTTGGTTCTGGTAGAAGATCTTGCCCAGGATCACCATGGCCTTAA 225 0.4933 MEDCHVAGYHIPKGTRLFVNAWKLHRDPSVWSDPEDFQLERFLTSHANLDVLGQHFELIPFGSGRRSCPGSPWP* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0859 74 Gene3D Cytochrome P450 1 73 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0859 74 SUPERFAMILY Cytochrome P450 1 71 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0859 74 PANTHER CYTOCHROME P450 82C3-RELATED 1 71 - -
Vvi9g0859 74 Pfam Cytochrome P450 2 71 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0859 74 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 61 70 IPR017972 GO:0005506|GO:0016705
Vvi9g0859 74 PRINTS E-class P450 group IV signature 9 23 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0859 74 PRINTS E-class P450 group IV signature 25 43 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0859 74 PRINTS E-class P450 group IV signature 52 68 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0859 74 PRINTS E-class P450 group IV signature 68 74 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0859 Vvi-Chr9 10976652 10976876 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0859 1 71 Cytochrome P450 AT4G31940 65.278 1.76e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0859 - - vvi:100267972 151.754