Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0858 ATGTCTAGAGGGAGCAAGATAGTGGAAAGTAGAAGCTACCAGTTAGTGAATCAGCAAAGTCCCAGACAATCCAGCATGGATACCCTTTCTCAGTTAGTAGCAATCTCGGGAATTCTGGGGTTGGTTTTATTGTATGGTGTATGGAGAGTTATGATTCTTGCTGGGAAGAGCAAGGGCAGGTCAGCCCCAGAGCCATTTGGTGCCTGGCCATTTCTAGGCCACCTTCCTATACTACGAGGCCAAACCCCAATATTCCGAACCCTTGGAGCCATGGCTGATAAGCATGGCCCCGTCTTCATGATCCGCCTTGGCGTGCACCGCGCACTTGTGGTGAGCAGTCGTGAGGCTGTTAAAGAATGCTTCACCACTAATGATAAGGTCTTTGCCTCACGCCCAAGTTCCAGTGCAGGAAAGATCTTAGGATACAACCACGCTGGATTTGGTTTCGCCCCTTATGGAGCCCTTTGGCGTGAGATGCGCAAGCTGTCCATGATGGAAATCCTCTCAGCCCGTCGCCTCGATGCATTAAAGCATGTGCAGATTTCGGAATTGGATCTTTCCATTAAAGATTTATACTCACTTGGAAAAGGCAGCGACTGGTTCCATCCAGTAAAGGTAGTGATGAGTGAATGGTTTCAACACCTCAGCTTCAATATTGTCCTAAAGATGATCGCAGGGAAGAGGTATTTCAACACTTCTGGCCATGGAAACGAGGAAGCAAGGCGGGCCATAGCAACAATTCAGAAACTCCTGTTTCTAACGGGGGCCTTTGTTTTGTCGGATGCCATTCCAGGTGTAGAATGGATGGATTCACAAGGGTATTTGGGGTCGATGAAGCAGGTGGCGAAGGAAGTGGACTCTCTTGTGGGAGGTTGGGTGGAAGAACATGAGATGAGGCTCAACAGCGAGGGCAACAAGAGGCAGGATTTCATTGATGTGATGCTATCGGTGCTTGAAGATACTTCCATGTTTGGCCATTCCAGGGAAACAGTCATCAAGGCAACAATAATGATTCTCATAGTGGGAGGCACTGACACTGTGTCTACAACCTCCACATGGCTTCTGTCTGCATTATTAAACAATAAACATGCTTTGAAGTGTGCTCAAGAGGAGCTAGATCTAAAAGTTGGTAGAGGCAGGTGGGTGGAAGAATCGGATATTCCAAACCTGCTTTACCTTCAAGCCGTTATCAAGGAAACCCTGAGGCTATACACAGCAACTCCTCTATCTGCGCCACACGAAGCCATGGAAGACTGTCATGTTGCTGGCTACCACATTCCAAAAGGCACCCGCTTGTTCGTGAATGCGTGGAAGTTGCACCGTGACCCAAGTGTCTGGTCCGACCCTGAAGATTTTCAGCCGGAGAGGTTTCTGACAACCCATGCGGATTTAGATGTTTTGGGGCAGCATTTTGAGCTCATCCCATTTGGTTCTGGTAGAAGATCTTGCCCAGGGATCACCATGGCCTTAAAATTGTTACCCTTGGTGATTGGTCGGCTGCTTCAAGGGTTTGACTTGTCAACACCATTGAACGCTCCGGTGGACATGAGAGAAGGCCTGAGTATTACCTTGGCTAAGCTGACTCCTCTGGAAGTCATGCTCACCCCACGCCTTCCTTCTCAATTCTATTAG 1632 0.4853 MSRGSKIVESRSYQLVNQQSPRQSSMDTLSQLVAISGILGLVLLYGVWRVMILAGKSKGRSAPEPFGAWPFLGHLPILRGQTPIFRTLGAMADKHGPVFMIRLGVHRALVVSSREAVKECFTTNDKVFASRPSSSAGKILGYNHAGFGFAPYGALWREMRKLSMMEILSARRLDALKHVQISELDLSIKDLYSLGKGSDWFHPVKVVMSEWFQHLSFNIVLKMIAGKRYFNTSGHGNEEARRAIATIQKLLFLTGAFVLSDAIPGVEWMDSQGYLGSMKQVAKEVDSLVGGWVEEHEMRLNSEGNKRQDFIDVMLSVLEDTSMFGHSRETVIKATIMILIVGGTDTVSTTSTWLLSALLNNKHALKCAQEELDLKVGRGRWVEESDIPNLLYLQAVIKETLRLYTATPLSAPHEAMEDCHVAGYHIPKGTRLFVNAWKLHRDPSVWSDPEDFQPERFLTTHADLDVLGQHFELIPFGSGRRSCPGITMALKLLPLVIGRLLQGFDLSTPLNAPVDMREGLSITLAKLTPLEVMLTPRLPSQFY* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0858 543 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506|GO:0016705
Vvi9g0858 543 FunFam Cytochrome P450 82C4 53 535 - -
Vvi9g0858 543 Gene3D Cytochrome P450 55 541 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0858 543 PANTHER CYTOCHROME P450 82C3-RELATED 40 543 - -
Vvi9g0858 543 Pfam Cytochrome P450 63 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0858 543 PRINTS P450 superfamily signature 342 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0858 543 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0858 543 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0858 543 PRINTS E-class P450 group I signature 116 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0858 543 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0858 543 PRINTS E-class P450 group I signature 394 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0858 543 PRINTS E-class P450 group I signature 331 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0858 543 PRINTS E-class P450 group I signature 435 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0858 543 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0858 543 PRINTS E-class P450 group I signature 351 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0858 543 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0858 543 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0858 543 CDD CYP82 96 537 - -
Vvi9g0858 543 SUPERFAMILY Cytochrome P450 63 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0858 Vvi-Chr9 10967030 10971463 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0858 62 543 Cytochrome P450 AT4G31940 50.203 2.96e-176 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0858 - K23136 vvi:100245650 1065.06