Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0792 ATGAGGAACTTCCCACTCAGTAGAGGCACTGTTGCTGGCATTCTTAAAGGTTATATTGGGCTCAGTGCTGCAGTATACACAGAGATCTATAATTCTGTGCTTCAAGAATCTGCTTCAAAGCTATTGCTGTTCCTCACACTCGGACTTCCTGTTTTATGTTTCGCTCTGATGTATTTTATTCGGGCTTGCACTCCTGCTTCTGGAGAAGACTCTTCAGAACATGGCCATTTCCTTTTCACCCAAGCTGCAAGTGTTTGTCTCGGCATCTATCTTCTTGCAACCACAGTTGTAGATGACTTGTTTAATCCAAGTGATGCACTTTCTAACACGTTCACTGGTATAATGGTTATTTTTCTGTTGTGTCCTCTTGCAATTCCTCTGAAAATGACACTTTTCCCTTCAAATTCCAAGAAAAATCTTCCTCCAGTTGGTTCTTCAGATAGTTTAGTGCAGGGAGAAGGGAATTCAAACCAGACAGAGCCTTTGTTGACACCATCCTCATCAGCAACTTGTCTTGGAAGTTTTCATGAGGGTGAGTATGCTTCAGATATAGACATGCTTCTGGCTGTGGGCGAGGGAGCAATCAAGAAGAAAAGGAAACCTAAGAGAGGGGAGGACTTCAAGTTTCGTGAAGCTTTTATTAAAGCTGATTTCTGGCTTCTGTGGTTGGTCTACTTTCTTGGGGTCGGTTCTGGAGTAACTGTTCTCAATAATTTGGCACAGATAGGGGTTGCATTTGGTGTGACAGACACAACAATATTATTGTCTCTCTTCAGTTTTTGCAATTTCTTGGGTCGACTCTTTGGTGGTGTGGTTTCTGAATACTTTGTCAGGACAAGAACACTTCCTCGGACAATTTGGATGACATTCTCACAAGTGGTCATGGTTGTAACATTCCTTCTTTATGCATCAGCTCTCAGTGGTACCCTTTACGCTTCAACTGCTTTGCTTGGAATCTGTTACGGGGTTCAGTTTTCCATAATGGTTCCATGTGCCTCCGAGCTCTTTGGTTTGAAACATTTTGGTGTAATTTACAACTTCATGCTGCTAGGCAATCCTATAGGTGCACTACTCTTCTCAGGTCTGCTTGCTGGTTATGTCTACGACTTTGAAGCTGCCAAGCAGCAATCATCGACCTGTCTGGGTGGAACTTGCTTTCGGCTTACATTCCTGGTTCTAGCTGGTGCCTGTGGGCTGGGCACCATCTTGAGCATAATTCTTACAATTAGAATAAAACCGGTTTACCAAATGCTCTATGCTGGGGGTTCTTTTCGTCTTCCTTCAAGTTCCAACCAGTCATAA 1302 0.4324 MRNFPLSRGTVAGILKGYIGLSAAVYTEIYNSVLQESASKLLLFLTLGLPVLCFALMYFIRACTPASGEDSSEHGHFLFTQAASVCLGIYLLATTVVDDLFNPSDALSNTFTGIMVIFLLCPLAIPLKMTLFPSNSKKNLPPVGSSDSLVQGEGNSNQTEPLLTPSSSATCLGSFHEGEYASDIDMLLAVGEGAIKKKRKPKRGEDFKFREAFIKADFWLLWLVYFLGVGSGVTVLNNLAQIGVAFGVTDTTILLSLFSFCNFLGRLFGGVVSEYFVRTRTLPRTIWMTFSQVVMVVTFLLYASALSGTLYASTALLGICYGVQFSIMVPCASELFGLKHFGVIYNFMLLGNPIGALLFSGLLAGYVYDFEAAKQQSSTCLGGTCFRLTFLVLAGACGLGTILSIILTIRIKPVYQMLYAGGSFRLPSSSNQS* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0792 433 Gene3D MFS general substrate transporter like domains 213 415 IPR036259 -
Vvi9g0792 433 Pfam Nodulin-like 1 127 IPR010658 -
Vvi9g0792 433 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 416 - -
Vvi9g0792 433 SUPERFAMILY MFS general substrate transporter 9 413 IPR036259 -
Vvi9g0792 433 MobiDBLite consensus disorder prediction 143 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0792 Vvi-Chr9 9424936 9426822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0792 1 432 Nodulin-like Gene Family AT1G80530 61.432 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0792 - - vvi:100262975 843.958