Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0790 ATGGAGAGTAATTATTCTGCTTTGCGGACCAACTCATTTGTAGAATTGCAAATACATAATGATAAGAATGAGGATGGTGTTTCTCTTGTGTCCCAAAACCCCAGATCTTCTGAGAAACCCCATGTAAAATTGCTGCCTCTTGATGAATCAAACAATGTAAATGATGTTGATGATGATTTTGATTTTGATATTGATAATTATCCGCTTATGGACGGCGGTGTGAGGAGCAATAAGGGATCTGGGATTAGTGGTGCAGTTTTTAATCTTACCACATCAATCATTGGGGCTGGTATCATGGCCCTGCCTGCCACAATGAAGATTCTTGGGGTGGTTTTAGGGTTTGTGTTGATAGTTTTGATGGGTATTTTGTCAGAGATTAGTGTTGAATTATTATTGCGGTTTTCGGTTCTTAATAAGGCATCTTCGTATGGGGAGGTTGTTCAATGTGCATTAGGGAGATCTGCAAGGATTTTGTCTGAAATTTGCATTATTGTAAACAATGCCGGTGTTCTGGTGGTTTACTTGATAATTATCGGAGATGTTTTATCAGGGTCTGCTCATCATGTTGGGGTTTTTGATCAATGGTTGGGGAATGGGGCATGGGATCAAAGGAAGCTTGTGATATTTGTTATTTTGGTCATTTTTCTTGCACCCCTTTGTTTTTTAGAAAAGATTGATTCATTGAGCTTGACTTCTGCCGCTTCAGTTGCTCTTGCAGTTGTGTTTGTCTTTGTTGCTTGTGTTGTTGCATTTATTAAGCTTGTTGAAGGGCAAATTGAGTCTCCAAGGATGGCTCCTGATTTTGGGTCTAAGGCAGCAATTCTGGATTTGCTTGTGGTGATCCCAATTATGACAAATGCTTATGTTTGTCACTTTAATGTTCAGCCTATCTATAATGAGCTTGAAGGACCCTCTCCTCAGAAGATGAACCGGGTAGGTAGGATCACAACTGTTCTTTGCATTGTGGTTTATGCTTTGACAGCCATATCGGGTTATCTACTCTTTGGAAAGGACACTGAATCTGATGTGCTGACTAATTTTGATAAGAACCTGGGAATTCGCTTCAGCTCAGCCCTGAACTATATTGTTCGAGTTGGATATGTTTTACATCTGGTTCTTGTTTTCCCTGTTGTCCATTTCTCTTTAAGGCAGACAGTGGATGCCCTGATGTTTGAGGCATCAGCTCCACTCTCGGAGAGTAGGAAGAGATCTTTGGCCTTAACGGTTGTGTTGTTAATGCTTATTTATTTTGGATCTACTATGATTCCAAATATTTGGACTGCTTTCAAGTTTACAGGGGCAACAACTGCAGTGTCATTGGGTTTTATATTCCCAGCTCTGATTGCATTGAAGTTAGGTGGCAAAGGGGTGGGTTTAAGCCTTGGGGAGAAGTTCTTCTCCTGGTTGATGTTGATATTGGCTACAATAGTTTCTGTTGTTGGAGTGATTGGCAATATTTATAGCCTCAAAAGCAAATCCGAATGA 1485 0.4034 MESNYSALRTNSFVELQIHNDKNEDGVSLVSQNPRSSEKPHVKLLPLDESNNVNDVDDDFDFDIDNYPLMDGGVRSNKGSGISGAVFNLTTSIIGAGIMALPATMKILGVVLGFVLIVLMGILSEISVELLLRFSVLNKASSYGEVVQCALGRSARILSEICIIVNNAGVLVVYLIIIGDVLSGSAHHVGVFDQWLGNGAWDQRKLVIFVILVIFLAPLCFLEKIDSLSLTSAASVALAVVFVFVACVVAFIKLVEGQIESPRMAPDFGSKAAILDLLVVIPIMTNAYVCHFNVQPIYNELEGPSPQKMNRVGRITTVLCIVVYALTAISGYLLFGKDTESDVLTNFDKNLGIRFSSALNYIVRVGYVLHLVLVFPVVHFSLRQTVDALMFEASAPLSESRKRSLALTVVLLMLIYFGSTMIPNIWTAFKFTGATTAVSLGFIFPALIALKLGGKGVGLSLGEKFFSWLMLILATIVSVVGVIGNIYSLKSKSE* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0790 494 Pfam Transmembrane amino acid transporter protein 81 484 IPR013057 -
Vvi9g0790 494 PRINTS Glutamate-aspartate symporter signature 364 383 - -
Vvi9g0790 494 PRINTS Glutamate-aspartate symporter signature 442 468 - -
Vvi9g0790 494 PRINTS Glutamate-aspartate symporter signature 96 116 - -
Vvi9g0790 494 PANTHER AMINO ACID TRANSPORTER 76 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0790 Vvi-Chr9 9402590 9404074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0790 1 494 Amino Acid or Auxin Permease AAAP Family AT1G80510 71.881 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0790 - - vvi:100261172 875.544