Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi9g0789 | ATGAAAATATTTTATTCTAGTCATGTAAGGTTGAGACTTTGGAAATGTGAGTATGTTAAAACTACATTGCTCCAAACTGAAGGTTGTGGTTGGGGTCTCCTCACTAATGAGAATATTAAGGTAGAAGAATTGGTTATTGAGCACTATGGAGAGGTGATTTCACGGACCAAAGCAAGAGGAAGGTCCCAAGTTTGTGTGTCTCAATGCATGAAGGATGCATATATAATTTTTCTTAATGCCAAGTATTGCGATGATGCCACTAAAAAGGGGAACCTAGGTAGGTTTAATCTAGCTAGGTTTATAAACCATTCATGGTAA | 318 | 0.3711 | MKIFYSSHVRLRLWKCEYVKTTLLQTEGCGWGLLTNENIKVEELVIEHYGEVISRTKARGRSQVCVSQCMKDAYIIFLNAKYCDDATKKGNLGRFNLARFINHSW* | 106 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi9g0789 | 105 | SUPERFAMILY | SET domain | 12 | 104 | IPR046341 | - | |
Vvi9g0789 | 105 | Pfam | SET domain | 30 | 104 | IPR001214 | GO:0005515 | |
Vvi9g0789 | 105 | Gene3D | SET domain | 5 | 105 | IPR046341 | - | |
Vvi9g0789 | 105 | PANTHER | SET DOMAIN PROTEINS | 13 | 104 | - | - | |
Vvi9g0789 | 105 | ProSiteProfiles | SET domain profile. | 14 | 105 | IPR001214 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi9g0789 | Vvi-Chr9 | 9385773 | 9386782 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi9g0789 | 20 | 104 | C2H2 Transcription Factor Family | AT2G23740 | 33.333 | 4.18e-06 | 42.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Vvi9g0789 | SET | 9.6e-05 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi9g0789 | - | - | vvi:100853610 | 114.005 |