Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0700 ATGGATGAAGTTTCTCTCAACAGTGAGCCAGTATATGATGATGAAGGTGATGAATTTGAGATTGAAGGAGATTGTGCAATGACAGAATATGTTGGTCAAACTGGCATAATTCAGAATCCCCTGCCTCCTGCTGTTGGAATGGAGTTTGAGTCCTACGAGGATGTTTATTACTTCTATAATTGTTATGCAAAGGAACAGGGATTTGGGGTTAGAGTGAGCAATACATGGTACAGAAAGAGTAAAGAAAGATACAGAGGAAAACTTAGCTGCAGTAGTGCAGGTTTCAAAAAGAAAAGTGAAGCAAACCGGCCAAGACCGGAAACAAGAACTGGTTGTCCAGCAATGATAAAATTCAGATTGATGGAGACCAAAAGGTGGAGAATTATTGAAGTCGAGCTTGAGCACAACCACTTGATTAGTCCAACAAGTGGAAAATTCTATAAATCACATAAGACTTTGGGTTTAGGGACCAAGAGACCTTTGCAGTCAGATGTTGCAGAAGAAGTACAAACGATTAGATTGTTCCGAACAGTTATCATAGATGCAGATGGTGATGGAAATGCAGATGTTGATGAAGGAGAATTTGGGAATAATGTTGATCACTCCAATCAATTGAGGCATGCGCTAACTGTGCTTAACCAGAATGGCATGGAAGAGATCCCACCTCAATACATTCTGTCAAGATGGAGAAAGGACACGAAGCGCACATATGTTCTTGATCATGGTTGCAGTGGCATCGATATTAATAACCCAGTACACAGGTATGATCATTTATATAGATGTGTTGTGCAAGTTGTTGAGGAAGCGAGGAAATCACAAGATCGTTACAAGGATGCAATACAGGCATTGGATGAGATACTGAACAAGGTTCATCTGATAGAAGATCATCCAGTGTAG 897 0.4036 MDEVSLNSEPVYDDEGDEFEIEGDCAMTEYVGQTGIIQNPLPPAVGMEFESYEDVYYFYNCYAKEQGFGVRVSNTWYRKSKERYRGKLSCSSAGFKKKSEANRPRPETRTGCPAMIKFRLMETKRWRIIEVELEHNHLISPTSGKFYKSHKTLGLGTKRPLQSDVAEEVQTIRLFRTVIIDADGDGNADVDEGEFGNNVDHSNQLRHALTVLNQNGMEEIPPQYILSRWRKDTKRTYVLDHGCSGIDINNPVHRYDHLYRCVVQVVEEARKSQDRYKDAIQALDEILNKVHLIEDHPV* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0700 298 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 206 291 IPR031052 GO:0006355
Vvi9g0700 298 Coils Coil 266 289 - -
Vvi9g0700 298 Pfam FAR1 DNA-binding domain 58 139 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0700 Vvi-Chr9 7412438 7414438 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vvi9g0700 FAR1 1.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0700 - K17604 vvi:100244087 422.935