Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0680 ATGGAAAAAAAGAGAGAGATGTTTGCAGGTGAGAATGGGTTGCAAGGAGACCCAAGGCTGAAGGCCATATCAGAAGCCATTAGAGTGGTGCCTCACTTCCCAAAGCAAGGTATCATGTTTCAAGACATAACAACTCTGTTACTGGATCACAAGGCCTTCAAGGACACTGTTGATATCTTTGTTGATCGTTACAGGGACATGGGCATCTCTGTCGTGGCTGGAGTTGAAGCGAGAGGATTCATGTTTGGTCCTTCTATTGCTTTGGCCATTGGAGCAAAATTCGTTCCTCTTCGGAAACCTAAAAAGTTGCCAGGAGAAGTTATTTCTGAAGCATATGTTCTGGAATATGGAACCGACCGTTTAGAAATGCATGTTGGAGCTGTTCAACCTGGGGAACGAGCATTGGTGATTGATGATCTGATTGCTACAGGTGGGACCCTCTGCGCAGCGATAAAACTATTAGAACGTGTGGGAGCTGAAGTAGTAGAATGTGCATGCGTTATCGGGTTGCCTGAGGCTAAGGGACAGTGCAGGTTAAACGGAAAGCCATTGTACATCCTTGTGGAGCCCCGCAAGTAG 579 0.4646 MEKKREMFAGENGLQGDPRLKAISEAIRVVPHFPKQGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGVEARGFMFGPSIALAIGAKFVPLRKPKKLPGEVISEAYVLEYGTDRLEMHVGAVQPGERALVIDDLIATGGTLCAAIKLLERVGAEVVECACVIGLPEAKGQCRLNGKPLYILVEPRK* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0680 192 NCBIfam adenine phosphoribosyltransferase 24 188 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vvi9g0680 192 Hamap Adenine phosphoribosyltransferase [apt]. 23 190 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vvi9g0680 192 Pfam Phosphoribosyl transferase domain 61 175 IPR000836 -
Vvi9g0680 192 CDD PRTases_typeI 57 189 IPR000836 -
Vvi9g0680 192 FunFam Adenine phosphoribosyltransferase 1 11 190 - -
Vvi9g0680 192 SUPERFAMILY PRTase-like 27 182 IPR029057 -
Vvi9g0680 192 Gene3D - 12 190 IPR029057 -
Vvi9g0680 192 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 15 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0680 Vvi-Chr9 7066555 7070084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0680 17 189 PRT Gene Family AT1G27450 74.566 2.68e-93 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0680 K00759 - vvi:100245840 382.489