Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0622 ATGTGTATACCTCTTTGCTTGGCCTTCCGCTATGGCCCTATAGTTTTCCTCCGTCTTGGTTCACGCCCTTCCCTTATTGTTTCTTCACCTTCTGTTGCTGAGGAATGTCTGACCAAAAACGATATCGTTTTTGCCAACCGCCCTCAGCTTATCGCCGGGAAATACATAGGCTACAACTACACCAGCCTCATCTGGGCCAACTATGGCGATCACTGGCGGAACCTCCGGCGAATCTCGACCCTCGAAATCCTCTCCTCCAGTTGCATTCAGATGCTTTCTGGAATTCGTGCTGATGAGGTGCGGTTGCTGGTTCTCTGGCTTTTGGAGCATGAGAACCAGACTGTGAACATGAAGGCGATGCTGTTTGAGATAACGACAAATGTGATGATGAGAATGATCGCTGGGAGGAGGTATTATGGCGGGAGCATGGCGGAGGCGGAGGCGGAGGAAACGGTGAAGTTCCGGGAGATAATGGCTGACACAATTCGGCTGGGAGATATGAGCAACATCGGAGATTATTTACCGATGTTGAGGTGGTTAGGGGTGAAGGGGAAGGAGGAGGGATTGAGAGAGTTGCAGAGGAAGAGAGATAGGTTCATGCAGAGCTTGATAGAAGAGCATAGAACAAGAATTGCCAAGGACAAGGAGTCATCTTCATCATGCTGTAATGGCGACGATGGAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGATGATTGAAGTGATGCTGTCGCTACAAGAGAAGGAACCTGATTACTATACGGACCTGATCATCAGAGGCCTCATGCTGGCTCTACTGGGAGCTGGAACTGATACCACAGCCACGACTATAGAATGGACACTATCACTTCTGCTGAACAACCCACATGCCCTAAAGAAGGCACAAATGGAGATTGATAATCATCTGGGGGACAACCATCTCATCCAAGAATCAGATTTAAACCAGCTTCCATATCTCCATTGTATCATAAAGGAGTCGCAGCGCATGCACCCTGTAGGCCCAATAATACCTCATGAGTCGTCCGGCGAGTGCACAGTAGGTGGTTATCGCATACCTCATGGGACGATGCTACTTGTTAATGTATGGGCTATACAGAATGACCCTAGAGTCTGGGAGGAGCCAAGGAAGTTCACGCCGGAGAGATTTGAGGGCATGGAACTGGAGAAACATGGGTTCAGGCTAATGCCATTTGGGTCAGGCAGGAGGGGTTGCCCTGGGGAGGGCTTAGCCGTACGTATGGTTGGGCTGGTGTTGGGATCATTGATTCAGTGCTTTGATTGGGAAAGTGTAGGTGAAGGGATGGTGGACATGAGTGAGGGGACTGGTCTTTCTTTGCCAAAGGCTCAGCCCTTGTTGGTTAGGTGTAGGCATCGTCCAGCCTTAGTGGACCTTCTTTCAAAAGCTTGA 1416 0.4936 MCIPLCLAFRYGPIVFLRLGSRPSLIVSSPSVAEECLTKNDIVFANRPQLIAGKYIGYNYTSLIWANYGDHWRNLRRISTLEILSSSCIQMLSGIRADEVRLLVLWLLEHENQTVNMKAMLFEITTNVMMRMIAGRRYYGGSMAEAEAEETVKFREIMADTIRLGDMSNIGDYLPMLRWLGVKGKEEGLRELQRKRDRFMQSLIEEHRTRIAKDKESSSSCCNGDDGEKKKKKKKKKKKTMIEVMLSLQEKEPDYYTDLIIRGLMLALLGAGTDTTATTIEWTLSLLLNNPHALKKAQMEIDNHLGDNHLIQESDLNQLPYLHCIIKESQRMHPVGPIIPHESSGECTVGGYRIPHGTMLLVNVWAIQNDPRVWEEPRKFTPERFEGMELEKHGFRLMPFGSGRRGCPGEGLAVRMVGLVLGSLIQCFDWESVGEGMVDMSEGTGLSLPKAQPLLVRCRHRPALVDLLSKA* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0622 471 CDD CYP81 12 454 - -
Vvi9g0622 471 MobiDBLite consensus disorder prediction 210 236 - -
Vvi9g0622 471 MobiDBLite consensus disorder prediction 210 229 - -
Vvi9g0622 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 400 409 IPR017972 GO:0005506|GO:0016705
Vvi9g0622 471 PANTHER CYTOCHROME P450 82C3-RELATED 7 461 - -
Vvi9g0622 471 Pfam Cytochrome P450 10 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0622 471 SUPERFAMILY Cytochrome P450 7 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0622 471 Gene3D Cytochrome P450 6 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0622 471 PRINTS E-class P450 group I signature 280 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0622 471 PRINTS E-class P450 group I signature 8 27 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0622 471 PRINTS E-class P450 group I signature 32 53 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0622 471 PRINTS E-class P450 group I signature 363 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0622 471 PRINTS E-class P450 group I signature 323 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0622 471 PRINTS E-class P450 group I signature 397 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0622 471 PRINTS E-class P450 group I signature 260 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0622 471 PRINTS E-class P450 group I signature 407 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0622 471 PRINTS E-class P450 group I signature 124 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0622 471 PRINTS P450 superfamily signature 271 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0622 471 PRINTS P450 superfamily signature 398 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0622 471 PRINTS P450 superfamily signature 407 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0622 471 PRINTS P450 superfamily signature 324 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0622 471 FunFam Cytochrome P450 family protein 4 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0622 Vvi-Chr9 6425996 6427661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0622 3 471 Cytochrome P450 AT4G37370 45.666 9.48e-147 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0622 - - vvi:100249221 891.338