Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0621 ATGGAGACAATGTACATGCGTATACCTCTTTGTTTGGCCTTGTATCTCTTCACTAGACACTTGCTTCATAAGCTCCATAACCTCCCACCGACTCCTTTTCTCTCTTTCCCCATAATTGGCCATCTCTACCTCTTAAAGAAGCCATTGCACCGGACCTTGGCGGGTATTTCCAGCCGCTACGGTCCCATAGTCTTCCTCCGTCTAGGTTCACGCCCTTCTCTTCTTGTTTCTTCACCTTCTGTTGCTGAGGTATGTCTGAACAAAAACGATATCGTTTTTGCCAACCGCCCTCAGCTTATCGCCGGGAAATACATAGGCTACAACTACACCAGCCTCGCCTGGGCCAACTATGGCGATCACTGGCGGAACCTCCGGCGAATCTCATCCCTCGAAATCCTCTCCTCCAGTCGCATTCAGATGCTTTCTGGAATCCGTGCTGATGAGGTGCGGTTGCTGGTTCGCTGGCTTTTGGAGAATGAGAACCAGACTGTGAACGTGAAGGCGATGCTGTTCGAGATAACGACAAATGTGATGATGAGAATGATCGCTGGGAAGAGGTATTATGGCGGAAGCATGGCGGAGGCGGAGGAAACGGTGAAGTTCCGGGAGATAATAGCTGATACACTCCGGTTGGGTGATACGACCAACGTCGGAGATTATTTACCGATGTTGAGGTGGTTAGGGGTGAAGGGGATGGAGAAGGGGTTGAGGGAGTTGCAGAGGAAGAGAGATAGGTTCATGCAGAGCTTGATAGAAGAGCATAGAACAAGAATGGCCGAGGAGAAGGAGTCATATTCATCATGCTCTAATGGCGATGATGGAGAGAAGAAGAAGAAGAAGACGATGATTGAAGTGATGCTGTCGCTACAAGAGAAGGAACCTGATTACTATACGGACCAGATCATCAGAGGCCTCATGCTGGTTCTACTGGGAGCTGGAACTGATACCACAGCCACGACTATAGAATGGACACTGTCGCTTTTGCTGAACAACCCACATGCCCTAAAGAAGGCACAAATGGAGATTGATAATCATCTGGGGAACAACCATCTCATCCAAGAATCAGATTTAAACCAGCTTCCGTATCTCCATTGTATCATAAAGGAGTCGCAGCGCATGTACCCTGCAGGCCCAATAATACCTCATGAGTCGTCCGGCGAGTGCACAGTAGGTGGTTATCGCATACCTCATGGGACGATGCTACTTGTTAATCTATGGGCTATACAGAATGACCCTAGAGTTTGGGAGGAGCCAAGGAAGTTCATGCCGGAGAGATTTGAAGGCATAGAACTGGAGAAACATGGGTTCAGGCTAATGCCATTTGGGTCAGGCAGGAGGGGTTGCCCTGGGGAGGGCTTAGCCTTACGTATGGTTGGGCTGGTGTTGGGATCATTGATTCAGTGCTTTGATTGGGAAAGTGTTGGTGAAGGGATGGTGGACATGAGTGAGGGGACTGGTCTTACTTTGCCTAAGGCTCAGCCCTTGTTGGTTAGGTGTAGGCCTCGTCCAGCCTTTGTGGACCTTCTTTCAAAAGCTTGA 1539 0.4932 METMYMRIPLCLALYLFTRHLLHKLHNLPPTPFLSFPIIGHLYLLKKPLHRTLAGISSRYGPIVFLRLGSRPSLLVSSPSVAEVCLNKNDIVFANRPQLIAGKYIGYNYTSLAWANYGDHWRNLRRISSLEILSSSRIQMLSGIRADEVRLLVRWLLENENQTVNVKAMLFEITTNVMMRMIAGKRYYGGSMAEAEETVKFREIIADTLRLGDTTNVGDYLPMLRWLGVKGMEKGLRELQRKRDRFMQSLIEEHRTRMAEEKESYSSCSNGDDGEKKKKKTMIEVMLSLQEKEPDYYTDQIIRGLMLVLLGAGTDTTATTIEWTLSLLLNNPHALKKAQMEIDNHLGNNHLIQESDLNQLPYLHCIIKESQRMYPAGPIIPHESSGECTVGGYRIPHGTMLLVNLWAIQNDPRVWEEPRKFMPERFEGIELEKHGFRLMPFGSGRRGCPGEGLALRMVGLVLGSLIQCFDWESVGEGMVDMSEGTGLTLPKAQPLLVRCRPRPAFVDLLSKA* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0621 512 CDD CYP81 61 495 - -
Vvi9g0621 512 SUPERFAMILY Cytochrome P450 29 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0621 512 Pfam Cytochrome P450 30 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0621 512 Gene3D Cytochrome P450 23 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0621 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Vvi9g0621 512 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0621 512 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0621 512 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0621 512 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0621 512 FunFam Cytochrome P450 family protein 21 505 - -
Vvi9g0621 512 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0621 512 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0621 512 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0621 512 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0621 512 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0621 512 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0621 512 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0621 512 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0621 512 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0621 512 PANTHER CYTOCHROME P450 82C3-RELATED 10 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0621 Vvi-Chr9 6420606 6422261 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0621 14 512 Cytochrome P450 AT4G37370 47.327 9.27e-163 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0621 - - vvi:100266385 997.267