Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0609 ATGTATGGAAGAAGGGCATGTCAGCTGATAAAGGAATTCTCATCTGCTGAAAAAGGGCAGCTCACTGGTTTCAATAGTGACATGTTTGATCAAGTAGTCAAAGAATGCAGTACTCATTACCTTGAACTTCAATCTTTGATGAGGAAAATCCAGGAAGAAGGAATGGACATTCAAACAACTAGAAATGCTGATCACTTTGGGATGGTCATCCACCATCTTTCTTTAATGCGCAACAAGCGCTGCCTTATGGCATATGTGTATAATCGAGCAGAAATTATTAGAAATTTGAGATGGAAGATAGGGCCTGTTCTCCCTCAAGAAATTCATGAGAAGCTTAGCTACTCAGAGGAGGAGTATTTCAAGAATCATTCTACAGCTCTAGAATCATATATGTCAGAACTGGAGCTTGATTTGACAGTGGATATGGTGCCGCCCAAAGATCCCTACATCCAGGTGAGAGTCCTTGATGACATTGGTGAGGTGTTGCTTAGTGATCAGTCAGCCAACCTTGCTTGCCACTCAATGCACTTTCTTAAGCGGATTGATGCTGAGCAGTTCATCTCTCAGGGCTTGATGGAGGAGCTCACAGACTGA 594 0.4259 MYGRRACQLIKEFSSAEKGQLTGFNSDMFDQVVKECSTHYLELQSLMRKIQEEGMDIQTTRNADHFGMVIHHLSLMRNKRCLMAYVYNRAEIIRNLRWKIGPVLPQEIHEKLSYSEEEYFKNHSTALESYMSELELDLTVDMVPPKDPYIQVRVLDDIGEVLLSDQSANLACHSMHFLKRIDAEQFISQGLMEELTD* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0609 197 CDD GINS_A_psf1 3 136 IPR005339 GO:0000811|GO:0006260
Vvi9g0609 197 Gene3D - 1 134 - -
Vvi9g0609 197 CDD GINS_B_Psf1 148 195 - -
Vvi9g0609 197 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
Vvi9g0609 197 PANTHER PARTNER OF SLD5 1 196 IPR005339 GO:0000811|GO:0006260
Vvi9g0609 197 Pfam GINS complex protein 52 116 IPR021151 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0609 1 196 Core DNA Replication Machinery Family AT1G80190 62.000 4.94e-94 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0609 K10732 - vvi:100256728 398.667