Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0572 ATGGCTCTAGTGTTTGTGTTGAAGGTTGTGGATTATCTTTGGTGGAGACCCAAGAGAATTGAGAAACACTTCTCCAAGCAAGGTATCAGAGGACCCCCATATCAGTTCTTCATAGGCAACATAAAGGAGATTGTGGGGCTGACCTTGAAGACTTCATCTCAGCCCATGCCTCTCTCTGATCACAACATCCTCCCCAGAGTTCTTTCCTTCTATCATCACTGGAAGAAAATCTATGGTGCAACCTTCCTGGTATGGTTTGGACCGACATCTCGCGTCACCATCTCAGATCCAGTACTCATTCGAGAAATATTTATCTCCAAAGCAGAATTCTATGAGAAAAATGAGTCACACCCTCTTGTCAGAAAGCTTGAAGGTGATGGCTTGTTGACCCTCCAAGGAGAAAAATGGGCTCACCATAGAAAGATCATCTCACCAACCTTTCACATGGAGAATGTCAAACTAATGATTCCAACCATGGGAAAAACCATGGCGGCAATGTTGGACAAGTGGTCAACAATGGCGAATTCAGACGAGGTGGAGATCGAAGTCTCAGAATGGTTTCAAAGATTGACTGAAGAAGTGGTTACCAGAACAGTCTTTGGGACCAGCTATGAAGATGGAAAATCAATTTTCCAGTTGCAAGCCCAACAAATGGTATCTGCCATAGAGTCCTTTCAAAAGGTCTTCATCTCTACGTACAGATTCCTTCCCACCAAAAAGAACAGAGATTCTTGGAAATTGGATAAAGAAATCTCAAAATCTTTAGTAGAACTCATAGAGCGGAGGAGAAAATATCCAGTGGCAAATTCATGCTCGGAAGATTTGTTGGAGGTGATGATCAGGGCAAGTATAATGGAAGATAATATTGAAACAATAAACTCCAATTCTTCGGTTTCTTCTTCTTCTTCTTCTTCTTCGTCGTCGTCATCTCCGATCACAGTTTTTGACATTGTTGAAGAATGCAAGAGCTTTTTCTTCGCCGGAAAACATACGACGGCGAATTTGTTGACATGGACAACAATTCTCCTAGCAATGCACCCTCAATGGCAAAAATTGGCTAGGGAAGAGGTCTTGAGAGTGTGTGGGGCACGTGACATCCCAAGCAAAGATGATTTTTCAAAGCTTAAGACGCTGGGTATGATCCTGAACGAGTCACTGAGACTGTACCCACCAGCAGTGGCCACGATCAGACGGGCCAAAGCTGATGTTCATCTTGGAGGGTGTATGATGATCCCTCGTGGGACCGAGCTCCTCATCCCCATCTTAGCCGTCCATCACGACCCAGGGCTGTGGGGCCAAGATGCCAATGAATTCAACCCCGCTCGATTCTCGCAAGGTGTGGCCCACGCTGCCAAGCATCCCATGGCATTCCTACCCTTCGGGCTTGGTGCCCGCAGGTGCATCGGCCAAAACCTAGCCATTTTGCAGACGAAATTGGCCATGGCTATGATCCTGCAACGCTTCTCTTTCAGTCTGGCTCCCACCTACCAACATGCACCAATGGTTCTAATGCTCCTACATCCACAGTCTGGTGCACCCATAATTTTTCGTGAATTATCAGACACCATGAACTATTCATAG 1581 0.4573 MALVFVLKVVDYLWWRPKRIEKHFSKQGIRGPPYQFFIGNIKEIVGLTLKTSSQPMPLSDHNILPRVLSFYHHWKKIYGATFLVWFGPTSRVTISDPVLIREIFISKAEFYEKNESHPLVRKLEGDGLLTLQGEKWAHHRKIISPTFHMENVKLMIPTMGKTMAAMLDKWSTMANSDEVEIEVSEWFQRLTEEVVTRTVFGTSYEDGKSIFQLQAQQMVSAIESFQKVFISTYRFLPTKKNRDSWKLDKEISKSLVELIERRRKYPVANSCSEDLLEVMIRASIMEDNIETINSNSSVSSSSSSSSSSSSPITVFDIVEECKSFFFAGKHTTANLLTWTTILLAMHPQWQKLAREEVLRVCGARDIPSKDDFSKLKTLGMILNESLRLYPPAVATIRRAKADVHLGGCMMIPRGTELLIPILAVHHDPGLWGQDANEFNPARFSQGVAHAAKHPMAFLPFGLGARRCIGQNLAILQTKLAMAMILQRFSFSLAPTYQHAPMVLMLLHPQSGAPIIFRELSDTMNYS* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0572 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Vvi9g0572 526 Gene3D Cytochrome P450 12 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0572 526 FunFam Cytochrome P450 734A1 14 520 - -
Vvi9g0572 526 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0572 526 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0572 526 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0572 526 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0572 526 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0572 526 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0572 526 PANTHER CYTOCHROME P450 FAMILY MEMBER 4 511 - -
Vvi9g0572 526 SUPERFAMILY Cytochrome P450 24 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0572 526 Pfam Cytochrome P450 68 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0572 526 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0572 526 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0572 526 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g0572 526 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0572 Vvi-Chr9 5786006 5788706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0572 6 521 Cytochrome P450 AT2G26710 66.221 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0572 K15639 - vvi:100263507 1031.55