Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0571 ATGGGTTTTGGGAGGAAGATCAGGATCGGAGGCGATGGTTTTTCAGGAATCAACCGTTTTTTCTCGAGGCTCAGTCGCCGCAGATATGATTCTGAGGTCTCCGCTGCTCTTCCAGCCCCACCATTACTTATTCTGAAGCAGGACCAAAATGGACCTGGAGTTGCTGGCATTAAATCCCTAAGAGTGCTTGCACTACTTGGGGCAGGTGTTTCAGGCCTTTTGAGCTTTGCAACAATAGCTTCTTCAGATGAGGCTGAACATGGCCTGGCATGTCCAAACTATCCATGGCCTCACAGCGGCATTCTCAGTTCATATGACCATGCTTCGATTCGGCGGGGTCACCAGGTTTACCAGCAAGTTTGTGCTTCTTGCCATTCAATGTCTTTAATTTCATTTCGTGATCTTGTGGGTGTGGCATACACTGAAGAAGAGACGAAGGCTATGGCAGCTGAGATTGAAGTGGATGATGGGCCTAATGATGAAGGTGAGATGTTTACTCGCCCTGGAAAGCTAAGTGATCGTTTTCCTCAGCCTTATGCAAATGAACAAGCAGCTAGATTTGCTAATGGAGGAGCATATCCTCCAGATCTAAGTCTCATCACCAAGGCCCGCCACAATGGTCAGAATTATGTATTTGCTCTTTTAACTGGTTACCGTGATCCTCCAGCTGGTGTTTCAATTCGAGACGGGCTGCACTATAATCCTTATTTCCCTGGTGGGGCAATAGCTATGCCCAAAATGCTCATCGATGGTGCTGTTGAGTATGAAGATGGTACCCCTGCCACAGAAGCACAAATGGGGAAAGATGTTGTCACATTTTTATCATGGGCTGCAGAGCCAGAAATGGAAGAGAGAAAACTGATGGGATTTAAATGGATATTTGTGTTGTCACTTGCACTTCTCCAAGCAGCTTACTACCGACGCCTAAAATGGTCAATCTTCAAGTCCCGTAAGCTGATTGTCGATGTTGTCAACTGA 978 0.4652 MGFGRKIRIGGDGFSGINRFFSRLSRRRYDSEVSAALPAPPLLILKQDQNGPGVAGIKSLRVLALLGAGVSGLLSFATIASSDEAEHGLACPNYPWPHSGILSSYDHASIRRGHQVYQQVCASCHSMSLISFRDLVGVAYTEEETKAMAAEIEVDDGPNDEGEMFTRPGKLSDRFPQPYANEQAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIRDGLHYNPYFPGGAIAMPKMLIDGAVEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLKWSIFKSRKLIVDVVN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0571 325 Gene3D - 85 280 IPR036909 GO:0009055|GO:0020037
Vvi9g0571 325 Pfam Cytochrome C1 family 96 312 IPR002326 GO:0009055|GO:0020037
Vvi9g0571 325 ProSiteProfiles Cytochrome c family profile. 108 260 IPR009056 GO:0009055|GO:0020037
Vvi9g0571 325 SUPERFAMILY Cytochrome c 89 279 IPR036909 GO:0009055|GO:0020037
Vvi9g0571 325 PRINTS Cytochrome C1 signature 192 216 IPR002326 GO:0009055|GO:0020037
Vvi9g0571 325 PRINTS Cytochrome C1 signature 241 260 IPR002326 GO:0009055|GO:0020037
Vvi9g0571 325 PRINTS Cytochrome C1 signature 114 133 IPR002326 GO:0009055|GO:0020037
Vvi9g0571 325 PRINTS Cytochrome C1 signature 280 295 IPR002326 GO:0009055|GO:0020037
Vvi9g0571 325 PRINTS Cytochrome C1 signature 159 179 IPR002326 GO:0009055|GO:0020037
Vvi9g0571 325 PRINTS Cytochrome C1 signature 94 113 IPR002326 GO:0009055|GO:0020037
Vvi9g0571 325 PRINTS Cytochrome C1 signature 230 241 IPR002326 GO:0009055|GO:0020037
Vvi9g0571 325 PRINTS Cytochrome C1 signature 261 280 IPR002326 GO:0009055|GO:0020037
Vvi9g0571 325 FunFam Cytochrome c1, heme protein 85 280 - -
Vvi9g0571 325 Gene3D - 281 324 - -
Vvi9g0571 325 PANTHER CYTOCHROME C1 55 322 IPR002326 GO:0009055|GO:0020037
Vvi9g0571 325 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 280 324 IPR021157 -
Vvi9g0571 325 FunFam Cytochrome c1, heme protein, mitochondrial 281 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0571 Vvi-Chr9 5759754 5766138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0571 21 325 Chloroplast and Mitochondria Gene Families AT3G27240 80.984 4.41e-168 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0571 K00413 - vvi:100261810 637.106