Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0568 ATGGATTGTGTGAGCCCAATTTTGGATATTGCTGCTTGCATATGGGATTGCAGTGCAAAGCGGGCAGTCTATATCCAGGAACTTGAAAAAAATCTCAACTCTCTGAGAAATGAAATGGTAGAATTGAAGAACAGGGGTGAAGATGTGAGGAGACGAGTTGAACTTGCAGAGCAGCAACAAATGATGCGCAGGAGGGAAGTGGATGGCTGGCTCCTAAATGTAGAAGTTATAGAAAGTGAAGTGTCCAGAGTTCTGCAAGAAGGCGATCGAGAAGTCCAAAAGAGATGTCTCAGAAGTTGTCCCAGGAACTGTTGGTCAAGCTACAAGACTGGAAAGATGGTACGGAGAAAGCTTGATGCTGTCTTTAAACTAAAGAATAAAGGAAGTTTTGACGTTGTGGCTTATAGAGTTCCTTCTTCTCTGGTGGATGAGAGGCCTATGGAAAAGACCGTAGGCTTAGATCTTACCTATGAGAGGGTTTGTAGCTGCCTCAAAGATGGGCAAGTGGGAATCATCGGCTTATATGGAATGGGGGGTGTTGGCAAAACAACCCTTTTGAAGAGAATCAACAATGAATTCCTTGCAACAAGCCATGACTTTGATATTGTGATTTGGGTAGTGGTGTCCAAACCAGCAAGGATTGAAAAAGTTCAGGAAGTCATTCGAAACAAATTACAGATCCAAGATGATCTGTGGAAAAATAGAACCGAGGATGAAAAGGCTGCAGAAATATGGAAGTATTTGAAGACAAAAAAGTTTGTGTTGTTGTTGGATGATATATGGGAGCGTCTTGATCTTTTGCAAGTAGGGGTTCCTCTTCCGAATGATCAGAATATGTCCAAGATTGTATTCACAACCCGATTAGAGAATGTGTGCCATCAAATGAGGGCTCAAGAGAGGATTAAACTAGAGTGTTTAGAATCTACAGAAGCCTTAGCTTTATTTCTGAAGGAGGTAGGAGAGGACACCTTAAATTCTCATTCAGATATATTGAAGCTTGCAAAAGTTGTTGCTGAAGAGTGCAAAGGCTTACCTCTTGCACTCATTACTATTGGACGGGCGATGGCTAGTATGAATGGTCCCTTAGCTTGGGAGCAGGCAATACAAGAATTGAGGAAATTTCCTGCTGAAATTATAGGTATGGAGGATGATTTGTTTTATCGTTTGAAGTTCAGTTATGATAGCTTATGTGATGAAGTCCTGAAATCTTGCTTCATTTATTGTTCTATGTTTCCTGAGGATTATGAAATTGAGAATGATGCATTGATTGAACTTTGGATTGGAGAAGGGTTTTTGGATGAATTTGAGGACATCTATGAAGCACGTGATCGAGGACATAAAGTTATTGGAAATCTGAAGCATGCATGTTTATTGGAGAGCGGTGAATCTGAAAAGAGAGTTAAAATGCATGATGTGATTCGTGATATGGCTTTATGGTTAGCTTGTGAATGTGGGGCGGAGAAGAAAAAGTTTCTAGTATGCCAAGGTGCTGGTTCATTTGAAGTACAGGGAGTTGCAAAGTGGAAAGAGGCTCAAAGGATGTCACTGTGGGATAGCAGTTTTGAAGAAGTAATGCCTAAACCACTATGTTTCCCTAATCTCTTAACTTTGTTTCTCAGAAATTGTGTTGGGCTGAAGGCATTTCCTAGCGGATTCTTCCAGTTCATTCCTATTGTAAGAGTTTTGGACTTGTCAGGTACTCATCAATTGACCGAGTTATCTGGGGGAATTGATAAATTGGTGACCTTACAATATCTTAATCTGTCAAGAACAAATATAAGTGAGTTGCCAATTGAGATGAAGAATTTGAAAGAACTAAGGTGCTTGTTGATGGATGTTATGTATTCACTTTCAATAATTCCATGGCAAGTGATTTCGAGTTTTTCATCATTGCAGTTGCTTAGTATGTACAAGGCCTACCGCTTTAGTGTGGTTATGGAAGGTAATGTTTTATCTTATGGTGATAAAGTCTTACTGGAGGAATTGGAAAGTTTGGAACATTTGAATGATCTCTCTATCTCCTTATTTACGGCCCTTTCTTTCTATATATTGAAGAGCTCCCACAAATTGCAAAGGTGCATAAGACGTTTATGTCTAGATGACTGTGAGGATTTGACCTGTTTTGAGCTATCATCTTCATCCATTAAAAGAATGGCGCATCTAGAAAAACTTGAAATATGGACTTGCTGTCAATTAGAAGATATGAAAATTAACAAGGAGGAGAGGCATGGATTCATCCCTGATGACATTCTTGACCTGAAGTTCAATGGATACTTCCCCAAACTTCATCATGTCATTATTGTACGTTGCCCTAGATTGTTGGACCTTAAATGGCTTATTTATGCTCCAAGTCTTCAAATTCTTTATGTAGAGGACTGTGCATTGATGGAAGACATAATGAGTAATGATAGTGGAGTTTCAGAAATTGATGAAAATTTAGGCATATTTTCAAGACTCACGTCTCTAAATTTGATTAACCTGCCAAGGCTAAAGAGCATCTATCCACAGCCCCTACCCTTTCCATCACTAGAAGAAATCAATGTAGTTGCTTGCTTGATGCTAAGGAGTCTCCCATTCGATGTCAATAGTGCAACCAAGAGTCTGAAGAAGATTGGAGGAGAACAAAGGTGGTGGACCAGGCTGCAGTGGGGGGATGAAACCATCCAGCAAGCTTTCACTTCATATTTCACTCGAATCTATATCTCCCAATAG 2712 0.3982 MDCVSPILDIAACIWDCSAKRAVYIQELEKNLNSLRNEMVELKNRGEDVRRRVELAEQQQMMRRREVDGWLLNVEVIESEVSRVLQEGDREVQKRCLRSCPRNCWSSYKTGKMVRRKLDAVFKLKNKGSFDVVAYRVPSSLVDERPMEKTVGLDLTYERVCSCLKDGQVGIIGLYGMGGVGKTTLLKRINNEFLATSHDFDIVIWVVVSKPARIEKVQEVIRNKLQIQDDLWKNRTEDEKAAEIWKYLKTKKFVLLLDDIWERLDLLQVGVPLPNDQNMSKIVFTTRLENVCHQMRAQERIKLECLESTEALALFLKEVGEDTLNSHSDILKLAKVVAEECKGLPLALITIGRAMASMNGPLAWEQAIQELRKFPAEIIGMEDDLFYRLKFSYDSLCDEVLKSCFIYCSMFPEDYEIENDALIELWIGEGFLDEFEDIYEARDRGHKVIGNLKHACLLESGESEKRVKMHDVIRDMALWLACECGAEKKKFLVCQGAGSFEVQGVAKWKEAQRMSLWDSSFEEVMPKPLCFPNLLTLFLRNCVGLKAFPSGFFQFIPIVRVLDLSGTHQLTELSGGIDKLVTLQYLNLSRTNISELPIEMKNLKELRCLLMDVMYSLSIIPWQVISSFSSLQLLSMYKAYRFSVVMEGNVLSYGDKVLLEELESLEHLNDLSISLFTALSFYILKSSHKLQRCIRRLCLDDCEDLTCFELSSSSIKRMAHLEKLEIWTCCQLEDMKINKEERHGFIPDDILDLKFNGYFPKLHHVIIVRCPRLLDLKWLIYAPSLQILYVEDCALMEDIMSNDSGVSEIDENLGIFSRLTSLNLINLPRLKSIYPQPLPFPSLEEINVVACLMLRSLPFDVNSATKSLKKIGGEQRWWTRLQWGDETIQQAFTSYFTRIYISQ* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0568 903 Gene3D - 144 302 IPR027417 -
Vvi9g0568 903 Gene3D Ribonuclease Inhibitor 481 743 IPR032675 -
Vvi9g0568 903 Gene3D - 393 478 IPR036388 -
Vvi9g0568 903 FunFam Probable disease resistance protein At1g63360 393 479 - -
Vvi9g0568 903 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 33 858 - -
Vvi9g0568 903 SUPERFAMILY L domain-like 458 871 - -
Vvi9g0568 903 Gene3D - 305 392 IPR042197 -
Vvi9g0568 903 Gene3D Ribonuclease Inhibitor 757 872 IPR032675 -
Vvi9g0568 903 FunFam Probable disease resistance protein At5g66910 305 392 - -
Vvi9g0568 903 PRINTS Disease resistance protein signature 341 355 - -
Vvi9g0568 903 PRINTS Disease resistance protein signature 247 261 - -
Vvi9g0568 903 PRINTS Disease resistance protein signature 171 186 - -
Vvi9g0568 903 PRINTS Disease resistance protein signature 554 570 - -
Vvi9g0568 903 Pfam NB-ARC domain 158 394 IPR002182 GO:0043531
Vvi9g0568 903 Coils Coil 25 59 - -
Vvi9g0568 903 FunFam Probable disease resistance protein At1g61300 133 300 - -
Vvi9g0568 903 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 408 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0568 Vvi-Chr9 5737378 5740089 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0568 172 477 WRKY Transcription Factor Family AT5G45050 25.733 2.69e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0568 - K13459 vvi:104880254 1796.94