Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0565 ATGGACTCTGTGAACCCAATCCTCAATCTTGCCACTAGCCTGTGGAATTGCACGGCCAATTGTGTCTCTCATATCCGTGGTCTCAAACAAAATGTTGAAAACTTGAGACGCCTAATGGAGAGACTGCACCTTCGAAGTGAAGATGTAAAGAGAAGACTGGAACTTGAAGAGCGAGAACAGATGATACCCCTACTGGAGGTGCAAGGCTGGCTTTGTGACGTTGGTGTTTTGAAAAATGAAGTGGATGCGATTCTGCAAGAAGCGGATCTACTACTAGAAAAGCAATATTGTCTGGGAAGCTGTCGTAATATCCGGCCAAAATACAACCTTGTAAAGAGAGTGGCTGAAAAAAGCACGCATGCGGCGGAACTAATAGCAAGAGGAGATTTTGAAAGAGTGGCAGCCATGTTTCTTCGTCCTGTTGTAGATGAATTACCTCTTGGGCATACCGTGGGCTTAGATTCTCTGTCTCAGAGGGTGTGCAGCTGCTTTTACGAAGATGAAGTAGGAATTGTTGGATTATATGGAGTACGCGGTGTTGGCAAGACAACACTACTGAAGAAAATCAACAACGATCGCCTCCGCCAATTTTCTTACGAATTTAATATAGTGATTTGGGTTGCAGTGTCGAATCAAGCAAGCGTGACATCTGCTCAAGAGGTGATTGCAAACAAGTTACAGATCAATGGTAGAATGTGGCAAAATAGAAGTCAGGATGAAAAGGCCATAGAAATATTCAATATCATGAAAAGACAAAGGTTTTTGCTGTTGTTGGACAATGTATGCCAACGAATTGATCTCTCAGAAATAGGAGTTCCTCTTCCTCCGGATGCTAAAGACGGGTCCAAAGTAATAATCACAACTCGATCCTTGAAAATCTGCAGTGAGATGGAAGCTCAAAGGAGGTTTAAAGTAGAGTGTTTGCCATCGACAGAAGCCTTGAATTTGTTCATGCTGATGGTCAGAGAGGACACTCTAAGTTCTCATCCTGATATACGAAATCTTGCCTACAGCGTTATGGAGAGATGCAAAGGCTTGCCACTTGCACTCGTTACTGTTGGACGAGCATTGGCCGATAAGAATACTCTTGGGGAATGGGAACAAGCGATACAGGAGCTGGAGAACTTCCTACTAGAAATTTCAGACAGGTTGCCTCGTGCTGTGGTAGATGAAATGCCTCTTGGGCATATCGTGGGCTTAGATCGGTTGTATGAGAGAGTGTGCAGCTGCCTCACCGACTATAAAGTAAGAATTATTGGATTATATGGAACAGGAGGCATTGGAAAAACAACACTAATGAAGAAAATCAACAATGAGTTCCTCAAAACAAGTCACCAATTCGATACAGTGATTTGGGTTGCCGTGTCCAAGAAAGAAAAGGTGCAAGAAAGTGTGAGAGCGGCTCAAGAGGTGATTCGGAATCAATTACAGATCCCGGATAGCATGTGGCAAGGTAGAACAGAGGATGAAAGGGCTACAAAAATATTCAACATCTTGAAAACAAAAAAATTTGTGCTACTTTTAGATGATGTATGGCAACCATTTGATCTCTCAAAAATAGGAGTTCCTCCTCTTCCAAGTCTTCTGTATTTCAGAGTAATAATCACAACTCGATTACAGAAAACATGCACTGAAATGGAAGTTCAACGGAAGTTTAGAGTAGAGTGTTTGGAACAGGAAGAAGCCTTGGCTTTGTTCATGAAGAAGGTCGGAGAGAACACCCTGAATTCTCACCCTGATATACCGCAGCTTGCTGAAAAGGTGGCAGAGCGGTGCAAAGGCTTGCCACTTGCCATTGTTACTGTTGGACGAGCAATGGCTGATAAGAATTCTCCCGAGAAATGGGATCAGGCAATCCGAGAACTGAAGAAATTCCCAGTGGAAATTTCAGGTATGGAGCTTCAGTTTGGGGTTTTGAAACTAAGCTATGATTACTTGACAGACGATATCACCAAATCTTGTTTCATATACTGTTCTGTGTTTCCCAAGGGATATGAAATTAGGAATGATGAGCTTATAGAACATTGGATTGGTGAAGGATTTTTTGACCATAAGGACATATATGAAGCACGCAGACGAGGACACAAAATCATTGAAGACCTAAAGAATGCAAGCTTGTTAGAGGAGGGTGATGGATTTAAAGAATGTATCAAGATGCACGATGTGATACACGACATGGCTCTATGGATAGGTCAAGAATGTGGAAAAAAGATGAACAAGATTTTGGTGTATGAATCTCTTGGGCGTGTTGAGGCTGAGAGGGTCACCAGCTGGAAGGAGGCAGAAAGGATATCATTGTGGGGATGGAATATTGAGAAACTCCCAGAAACACCACATTGCTCTAATCTCCAGACTCTCTTTGTGAGGGAGTGCATTCAATTGAAGACGTTTCCAAGAGGATTCTTCCAATTCATGCCTCTCATAAGAGTTCTAGATTTGTCAACCACTCATTGTTTAACTGAGTTACCTGATGGGATTGACAGATTAATGAACTTGGAATACATTAATCTTTCAATGACACAAGTAAAAGAGTTGCCGATTGAGATCATGAAGTTGACAAAACTGAGGTGCTTGTTACTGGATGGTATGCTTGCACTTATAATTCCTCCACAATTGATATCTAGTCTTTCATCATTACAATTGTTCAGTATGTATGATGGAAATGCTTTATCTGCATTTCGCACCACCTTATTGGAGGAATTGGAGTCCATAGAAGCTATGGATGAGTTATCTCTCTCCTTCCGTAATGTTGCTGCTCTCAATAAATTACTGAGCTCCTACAAGTTACAAAGGTGCATAAGAAGATTAAGTATACATGACTGCAGAGATTTCTTGTTGCTTGAGCTATCATCAATATCTCTGAACTATTTGGAGACTCTTGTTATATTCAATTGTCTTCAATTGGAAGAAATGAAAATTAGTATGGAAAAACAGGGAGGCAAAGGATTGGAACAATCATATGATACCCCCAACCCTCAGTTGATAGCGAGAAGCAACCAACACTTCCGCAGTCTTCGTGATGTCAAGATTTGGAGTTGTCCAAAACTGTTGAACTTGACCTGGCTTATTTATGCTGCATGCCTTCAGTCACTTAGTGTTCAATCCTGTGAATCCATGAAAGAAGTGATAAGTATTGACTATGTAACTTCAAGTACACAGCACGCCAGCATATTCACAAGGCTCACATCTCTAGTATTAGGTGGTATGCCAATGCTAGAGAGCATCTATCAGGGGGCACTGCTCTTCCCCTCATTGGAAATAATCTCCGTGATCAATTGCCCGAGGCTAAGAAGGCTCCCAATCGATTCAAACAGTGCCGCCAAGAGCTTAAAGAAAATTGAAGGAGATCTAACCTGGTGGGGAAGGTTGGAATGGAAGGATGAATCTGTGGAGGAGACTTTCACCAACTATTTTTGCCCACAATACTTGGCTGACCCAATCCAGCACTCAGGGGAAGTGCAGGGAAAGAAGAAACTGGTGGTAGAAGGTTCAACCTCAAGGGCAGCCACCTAA 3513 0.4213 MDSVNPILNLATSLWNCTANCVSHIRGLKQNVENLRRLMERLHLRSEDVKRRLELEEREQMIPLLEVQGWLCDVGVLKNEVDAILQEADLLLEKQYCLGSCRNIRPKYNLVKRVAEKSTHAAELIARGDFERVAAMFLRPVVDELPLGHTVGLDSLSQRVCSCFYEDEVGIVGLYGVRGVGKTTLLKKINNDRLRQFSYEFNIVIWVAVSNQASVTSAQEVIANKLQINGRMWQNRSQDEKAIEIFNIMKRQRFLLLLDNVCQRIDLSEIGVPLPPDAKDGSKVIITTRSLKICSEMEAQRRFKVECLPSTEALNLFMLMVREDTLSSHPDIRNLAYSVMERCKGLPLALVTVGRALADKNTLGEWEQAIQELENFLLEISDRLPRAVVDEMPLGHIVGLDRLYERVCSCLTDYKVRIIGLYGTGGIGKTTLMKKINNEFLKTSHQFDTVIWVAVSKKEKVQESVRAAQEVIRNQLQIPDSMWQGRTEDERATKIFNILKTKKFVLLLDDVWQPFDLSKIGVPPLPSLLYFRVIITTRLQKTCTEMEVQRKFRVECLEQEEALALFMKKVGENTLNSHPDIPQLAEKVAERCKGLPLAIVTVGRAMADKNSPEKWDQAIRELKKFPVEISGMELQFGVLKLSYDYLTDDITKSCFIYCSVFPKGYEIRNDELIEHWIGEGFFDHKDIYEARRRGHKIIEDLKNASLLEEGDGFKECIKMHDVIHDMALWIGQECGKKMNKILVYESLGRVEAERVTSWKEAERISLWGWNIEKLPETPHCSNLQTLFVRECIQLKTFPRGFFQFMPLIRVLDLSTTHCLTELPDGIDRLMNLEYINLSMTQVKELPIEIMKLTKLRCLLLDGMLALIIPPQLISSLSSLQLFSMYDGNALSAFRTTLLEELESIEAMDELSLSFRNVAALNKLLSSYKLQRCIRRLSIHDCRDFLLLELSSISLNYLETLVIFNCLQLEEMKISMEKQGGKGLEQSYDTPNPQLIARSNQHFRSLRDVKIWSCPKLLNLTWLIYAACLQSLSVQSCESMKEVISIDYVTSSTQHASIFTRLTSLVLGGMPMLESIYQGALLFPSLEIISVINCPRLRRLPIDSNSAAKSLKKIEGDLTWWGRLEWKDESVEETFTNYFCPQYLADPIQHSGEVQGKKKLVVEGSTSRAAT* 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0565 1170 Gene3D - 556 642 IPR042197 -
Vvi9g0565 1170 Gene3D - 308 383 IPR042197 -
Vvi9g0565 1170 Gene3D Ribonuclease Inhibitor 751 1124 IPR032675 -
Vvi9g0565 1170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 658 IPR027417 -
Vvi9g0565 1170 Gene3D - 643 728 IPR036388 -
Vvi9g0565 1170 FunFam Probable disease resistance protein At1g61300 138 302 - -
Vvi9g0565 1170 FunFam Probable disease resistance protein At5g66910 556 642 - -
Vvi9g0565 1170 FunFam Probable disease resistance protein At1g63360 643 729 - -
Vvi9g0565 1170 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 405 1100 - -
Vvi9g0565 1170 FunFam Probable disease resistance protein At1g61300 380 551 - -
Vvi9g0565 1170 Gene3D - 133 306 IPR027417 -
Vvi9g0565 1170 Gene3D - 384 555 IPR027417 -
Vvi9g0565 1170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 377 IPR027417 -
Vvi9g0565 1170 Coils Coil 25 59 - -
Vvi9g0565 1170 SMART AAA_5 415 561 IPR003593 GO:0016887
Vvi9g0565 1170 SMART AAA_5 168 310 IPR003593 GO:0016887
Vvi9g0565 1170 Pfam NB-ARC domain 405 644 IPR002182 GO:0043531
Vvi9g0565 1170 Pfam NB-ARC domain 165 380 IPR002182 GO:0043531
Vvi9g0565 1170 PRINTS Disease resistance protein signature 592 606 - -
Vvi9g0565 1170 PRINTS Disease resistance protein signature 418 433 - -
Vvi9g0565 1170 PRINTS Disease resistance protein signature 803 819 - -
Vvi9g0565 1170 PRINTS Disease resistance protein signature 498 512 - -
Vvi9g0565 1170 FunFam Probable disease resistance protein At5g66910 307 388 - -
Vvi9g0565 1170 SUPERFAMILY L domain-like 711 1113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0565 Vvi-Chr9 5694502 5698291 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0565 416 701 WRKY Transcription Factor Family AT5G45050 25.914 2.57e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0565 - K13459 vvi:100265187 2305.02