Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0559 ATGGAGCAAATCAAGACTCCATTCAGAGGAATAGCAGAAGATATCCGAGGAAGAGCATTATGTTATAGGCAAGACTGGACCGATGGTATTCGATCCCGCATTCGGATATTGGCTCCAACTACTTACATATTCTTTGCTTCAGCCCTTCCTGTTATAGCCTTTGGTGAGCAATTGAGTAGAGATACAGATGGAAGTTTAAGCACAGTGGAAACTTTAGCTTCTACTGCTATTTGTGGTATCATCCACTCAATTCTTGGTGGGCAACCTCTTTTGATATTAGGAGTTGCAGAACCTACTGTCATAATGTACACGTATCTGTACAACTTCGCCAAAGGAAGGGCCGAGTTGGGACAAGAACTCTTTTTGGCATGGGCTGGATGGGTTTGTGTGTGGACAGCTCTCATGCTGTTCCTTCTTGCAATATTCAATGCTTGTGATATCATCAATAGGTTTACAAGGATTGCAGGGGAACTTTTTGGCATGTTGATTGCTGTTCTCTTCATTCAAGAGGCCATCAAGGGAGTGGTGAATGAGTTTAGGGTTCCTAAAGGGGAAGACCCAAAGGCAGAGAAGTACCAATTCCAGTGGCTCTATGTCAATGGGCTGCTCAGTATTATATTTGTTTTTGGTCTGCTCTACACTGCCTTAAAGAGCCGAAAGGCACGGTCATGGCTGTATGGCACAGGGTTGTTCAGAAGTTTCATTGCAGACTATGGGGTTCCATTGATGGTTGTAGTGTGGACAGCCCTGTCTTTCAGTGTGCCAAGCAAAGTTCCGTCTGGGGTTCCCAGGAGGCTCAATAGCCCTCTCCCTTGGGACTCTGAATCTGTATACCATTGGACTGTGATCAAGGATATGGGCAATGTCCCTCCAGCATACATCTTTGCTGCCATTATTCCTGCTTTGATGATAGCCGGGCTTTATTTCTTCGATCACAGTGTTGCTTCACAGATGGCACAGCAGAAGGAGTTCAATCTCAAGAAACCTTCTGCTTATCACCATGACATCTTGCTGTTAGGATTTATGACTCTGCTTTGTGGATTGCTTGGATTACCTCCTTCAAATGGGGTCCTGCCACAGTCCCCCATGCACACTAAGAGCCTTGCTACACTTAAAAGACAGCTGATTAGGAAGAAAATGGTGAAAAGTGCCAAGGAAAGCATAAAACAGAAAGCCGCCAATCCTGAAATCTATAGCAATATGCAAGCTGTGTTCATTAAAATGGACAATACCCAACCTACAAAATCAGTAGTTAAAGAGTTGGAAGACCTGAAAGAGGCGGTCATGAAGGGAGAAAATAAACAAGCAAACAAAGAGGAAAATGCCACAGGCACATTTGATCCAGAGCAGCATATTGACCCCTACTTGCCCGTTCGGGTTAATGAGCAGAGAGTGAGCAATCTGCTGCAGTCCCTCCTTGTGGCCGCAGCAGTATTCGCTATGCCCTTAATAAAGAAGATACCAACATCCGTTCTTGCAGGATACTTTGCCTACATGGCCATTGACAGCCTCCCAGGGAACCAATTCTGGGAGAGGTTCCTACTTGTCTTCATCACTCCTCAGCGACTCTACAAGGTGAAGGAAGGGGTCCATGCTTCATTTGTAGACATGGTACCATTCAAGTCTATAACCATGTTCACCCTCTTCCAGTTGGCATACTTCATGTTGTGTTTTGGGGTGACATGGATACCTATAGCTGGAATTCTTTTCCCCTTACCATTCTTCATTCTCATAGGCATTAGACAGTATATCCTCCCTAAATTCTTTGACTCTCATCATCTCCGGGAGCTGGATGCAGCTGAATATGAAGAAGTTGCTGTGGCCCTCACCGGACATCCTCTTGGCCTGTCTTCTAAGGAAGTGGAATCAACTCATTCCGGAAAGGCAGAAGATGGAATGGATTTGAGTGATGGGGAGATATTAGATGAACTAACGACTAGTAGAGGGGAGGTGAAGAGGAGGACTCTAAGCTTTGGGGAAGAAAAACATGCCCAAGAAAGATACTGA 2007 0.4509 MEQIKTPFRGIAEDIRGRALCYRQDWTDGIRSRIRILAPTTYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSILGGQPLLILGVAEPTVIMYTYLYNFAKGRAELGQELFLAWAGWVCVWTALMLFLLAIFNACDIINRFTRIAGELFGMLIAVLFIQEAIKGVVNEFRVPKGEDPKAEKYQFQWLYVNGLLSIIFVFGLLYTALKSRKARSWLYGTGLFRSFIADYGVPLMVVVWTALSFSVPSKVPSGVPRRLNSPLPWDSESVYHWTVIKDMGNVPPAYIFAAIIPALMIAGLYFFDHSVASQMAQQKEFNLKKPSAYHHDILLLGFMTLLCGLLGLPPSNGVLPQSPMHTKSLATLKRQLIRKKMVKSAKESIKQKAANPEIYSNMQAVFIKMDNTQPTKSVVKELEDLKEAVMKGENKQANKEENATGTFDPEQHIDPYLPVRVNEQRVSNLLQSLLVAAAVFAMPLIKKIPTSVLAGYFAYMAIDSLPGNQFWERFLLVFITPQRLYKVKEGVHASFVDMVPFKSITMFTLFQLAYFMLCFGVTWIPIAGILFPLPFFILIGIRQYILPKFFDSHHLRELDAAEYEEVAVALTGHPLGLSSKEVESTHSGKAEDGMDLSDGEILDELTTSRGEVKRRTLSFGEEKHAQERY* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0559 668 PANTHER ANION EXCHANGE PROTEIN 3 606 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vvi9g0559 668 FunFam probable boron transporter 2 18 60 - -
Vvi9g0559 668 MobiDBLite consensus disorder prediction 618 638 - -
Vvi9g0559 668 Coils Coil 421 441 - -
Vvi9g0559 668 Gene3D Helical hairpin bin 18 60 - -
Vvi9g0559 668 Pfam HCO3- transporter family 201 374 IPR011531 GO:0006820|GO:0016020
Vvi9g0559 668 Pfam HCO3- transporter family 458 548 IPR011531 GO:0006820|GO:0016020
Vvi9g0559 668 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Vvi9g0559 668 MobiDBLite consensus disorder prediction 623 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0559 Vvi-Chr9 5613150 5616359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0559 1 665 Antiporters AT1G74810 70.509 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0559 K24194 - vvi:100249812 1305.81