Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0506 ATGGAGTTCCTGAGCTCAATTGTGGGTCTGATCCCCTGCTTCTATGATCACACCTCCAAGCATACGGTCTACATTCGTGATCTGAAAAAAAATCTCCAAGCCTTGAGCAAGGAAACGGTGGAGCTCAACAACTTGTATGAAGATGTGAAGGCAAGGGTTGAAGGTGCAGAGCAACGACAGATGATGCGCAGAAAGGAAGTGGGTGGCTGGATCTGTGAAGTAGAAGTCATGGTGACAGAAGTTCAAGAAATTCTGCAAAAGGGTGATCAAGAAATCCAGAAGAGATGTCTCGGATGCTGTCCCAGGAATTGTTGGTCTAGCTACAAGATTGGGAAGGCAGTAAGAGAAAAGCTGGTTGCTGTATCTGGTCAAATCGGCAAAGGACATTTCGATGTTGTAGCCGAGATGCTTCCTCGTCCTCTAGTAGATGAACTGCCCATGGAGGAGACTGTGGGCTCAGAATTGGCGTATGGCAGAATCTGTGGGTTTCTCAAAGATCCACAAGTGGGAATTATGGGATTATATGGAATGGGCGGTGTGGGCAAAACCACCCTCTTGAAGAAAATCCACAATAACTTCCTCCCTACATCCAGCGATTTTGATGTTGTGATTTGGGATGTGGTGTCGAAACCGTCCAACGTTGAAAAAATTCACAAAGTTCTTTGGAATAAATTACAACTCTCACGTGATGGATGGGAATGTAGAAGCACTAAGGAGAAGGCTGCCAAAATATTGAGAGTTTTGAAAACAAAGAAGTTCGTGTTGCTGTTGGATGACATCAGGGAGCGACTCGATCTCCTAGAAATGGGGGTCCCCCATCCCGATGCTCAAAATAAGTCCAAGATAGATGTGTGCCGCCAAATGCAAGCTCAGGAGAGTATAAAAGTGGAGTGTTTGTCATTAGAAGCAGCTTGGACTTTGTTTCAGAAGAAGGTAGGAGAAGAAACATTAAAGTCTCATCCACATATACTGAGGCTTGCAAAGATTGTTGCTAAAGAGTGCAAAGGTTTACCTCTCGCTTTGGTTACTGTTGGGCGAGCCATGGTGGGTGAGAAAGATCCCTCAAATTGGGACAAGGTAATACAAGATTTGAGCAAATTTCCAACTGAAATTTCAGGTATGGAAGATGAATTGTTTAATAAATTAAAAGTCAGTTATGATAGATTGTCTGACAATGCCATCAAATCTTGTTTTATACATTGTTCCTTATTCTCTGAAGATGTGGTGATTCGTATTGAAACCCTTATAGAGCAGTGGATTGGAGAGGGACTTTTGGGTGAAGTTCATGACATATACGAAGTGCGCAATCAAGGGCATAAAATTGTTAAAAAGCTAAAGCATGCATGTTTAGTGGAGAGTTACAGTTTAAGAGAAAAATGGGTTGTGATGCATGATGTGATCCACGATATGGCTTTATGGTTATATGGTGAATGTGGGAAGGAAAAGAACAAAATTTTAGTGTACAATGATGTTTTTAGGTTGAAGGAAGCTGCAAAAATTTCAGAACTTAAAGAGACGGAGAAGATGTCATTATGGGATCAGAATCTTGAGAAGTTCCCTGAAACATTGATGTGTCCCAATCTCAAGACTTTATTTGTGAGGAGATGTCATCAGTTGACGAAATTTTCGAGTGGATTCTTTCAATTTATGCCTCTAATTAGAGTTTTGAATTTGGCATGCAATGATAATTTAAGTGAGTTACCTATTGGGATTGGTGAATTGAATGACTTGAGATATCTTAATTTGTCATCCACAAGAATAAGAGAGTTGCCCATTGAGCTAAAAAATTTGAAAAATTTGATGATTTTGCATTTGAATTCTATGCAATCCCCTGTAACTATCCCACAAGACTTGATATCAAATCTCATATCTTTAAAGTTGTTCAGCCTGTGGAATACCAATATTTTAAGTAGAGTTGAAACCTTGCTTGAGGAGTTGGAGTCCTTGAATGACATCAATCATATACGAATCAGCATATCTAGTGCTCTTTCATTGAACAGATTAAAGAGAAGCCACAAATTATAG 2025 0.4015 MEFLSSIVGLIPCFYDHTSKHTVYIRDLKKNLQALSKETVELNNLYEDVKARVEGAEQRQMMRRKEVGGWICEVEVMVTEVQEILQKGDQEIQKRCLGCCPRNCWSSYKIGKAVREKLVAVSGQIGKGHFDVVAEMLPRPLVDELPMEETVGSELAYGRICGFLKDPQVGIMGLYGMGGVGKTTLLKKIHNNFLPTSSDFDVVIWDVVSKPSNVEKIHKVLWNKLQLSRDGWECRSTKEKAAKILRVLKTKKFVLLLDDIRERLDLLEMGVPHPDAQNKSKIDVCRQMQAQESIKVECLSLEAAWTLFQKKVGEETLKSHPHILRLAKIVAKECKGLPLALVTVGRAMVGEKDPSNWDKVIQDLSKFPTEISGMEDELFNKLKVSYDRLSDNAIKSCFIHCSLFSEDVVIRIETLIEQWIGEGLLGEVHDIYEVRNQGHKIVKKLKHACLVESYSLREKWVVMHDVIHDMALWLYGECGKEKNKILVYNDVFRLKEAAKISELKETEKMSLWDQNLEKFPETLMCPNLKTLFVRRCHQLTKFSSGFFQFMPLIRVLNLACNDNLSELPIGIGELNDLRYLNLSSTRIRELPIELKNLKNLMILHLNSMQSPVTIPQDLISNLISLKLFSLWNTNILSRVETLLEELESLNDINHIRISISSALSLNRLKRSHKL* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0506 674 PRINTS Disease resistance protein signature 171 186 - -
Vvi9g0506 674 PRINTS Disease resistance protein signature 247 261 - -
Vvi9g0506 674 PRINTS Disease resistance protein signature 334 348 - -
Vvi9g0506 674 PRINTS Disease resistance protein signature 572 588 - -
Vvi9g0506 674 ProSiteProfiles Leucine-rich repeat profile. 576 598 IPR001611 GO:0005515
Vvi9g0506 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 401 IPR027417 -
Vvi9g0506 674 Gene3D - 156 294 IPR027417 -
Vvi9g0506 674 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 33 665 - -
Vvi9g0506 674 FunFam Probable disease resistance protein At1g63360 386 473 - -
Vvi9g0506 674 SUPERFAMILY L domain-like 462 663 - -
Vvi9g0506 674 FunFam Probable disease resistance protein At5g66910 298 385 - -
Vvi9g0506 674 Gene3D - 298 385 IPR042197 -
Vvi9g0506 674 Pfam Leucine rich repeat 526 587 IPR001611 GO:0005515
Vvi9g0506 674 Gene3D Ribonuclease Inhibitor 481 674 IPR032675 -
Vvi9g0506 674 Gene3D - 386 472 IPR036388 -
Vvi9g0506 674 FunFam Probable disease resistance protein At1g61300 133 297 - -
Vvi9g0506 674 Coils Coil 25 59 - -
Vvi9g0506 674 Pfam NB-ARC domain 159 387 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0506 Vvi-Chr9 4889366 4892465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0506 172 404 WRKY Transcription Factor Family AT5G45050 25.714 9.98e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0506 - K13459 vvi:100246379 1085.86