Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0490 ATGGAGTTCCTGAGCTCAATCGTGGGTCTGATCCCCTGCTTCTATGATCACACCTCCAAGCATACGGTCTACATTCGTGATCTAAAACAAAATCTCCAAGCCTTGAGGAAGGAAATGGCGGAGCTCAACAACTTGTATGAAGATGTGAAGGCAAGGGTTGAAGGTGCAGAGCAACGACAGATGATGCGCAGAAAGGAAGTGGGTGGCTGGATCTGTGAAGTAGAAGTCATGGTGACAGAAGTTCAAGAAATTCTGCAAAAGGGTGATCAAGAAATCCAGAAGAGATGTCTCGGATGCTGTCCCAGGAATTGTTGGTCTAGCTACAAGATTGGGAAGGCAGTAAGCGAAAAGCTGGTTGCTGTATCTGGTCAAATCGGCAAAGGACATTTCGATGTTGTAGCCGAGATGCTGCCTCGTCCTCTAGTAGATGAACTGCCCATGGAGGAGACTGTGGGCTCAGAATTGGCGTATGGCAGAATCTGTGGGTTTCTCAAAGATCCACAAGTGGGAATTATGGGATTATATGGAATGGGCGGTGTGGGCAAAACCACCCTCTTGAAGAAAATCCACAATAACTTCCTCCCTACATCCAGCGATTTTGATGTTGTGATTTGGGATGTGGTGTCAAAACCGTCCAACGTTGAAAAAATTCAGAAAGTTCTTTGGAATAAATTACAACTCTCACGTGATGGATGGGAATGTAGAAGCACTAAGGAGGAGAAGGCTGCCGAAATATTGAGAGTTTTGAAAACAAAGAAGTTCGTGTTGCTGTTGGATGACATCTGGGAGCGACTCGATCTCCTAGAAATGGGGGTCCCCCATCCCGATGCTCAAAATAAGTCCAAGATAGTTTTCACAACCCGCTCACAGGATGTGTGCCGCCAAATGCAAGCTCAGAAGAGTATAAAAGTGGAGTGTTTGTCATCAGAAGCGGCTTGGACTTTGTTTCAGAAGAAGGTAGGAGAAGAAACATTAAAGTTTCATCCACATATACCGAGGCTTGCAAAGATTGTTGCTGAAGAGTGCAAAGGTTTACCTCTCTCTTTGGTTACTGTTGGGCGAGCCATGGTGGGTGAGAAAGATCCCTCAAATTGGGACAAGGTAATACAAGATTTGAGCAAATTTCCAGCTGAAATTTCAGGTATGGAAGATGAATTGTTTAATAGATTAAAAGTGAGTTATGATAGATTGTCTGACAATGCCATCAAATCTTGTTTTATACATTGTTCCTTATTCTCTGAAGATGTGGTGATTCGTATTGAAACCCTTATAGAGCAGTGGATTGGAGAGGGACTTTTGGGTGAAGTTCATGACATATATGAAGCGCGCAATCAAGGGCATAAAATTGTTAAAAAGCTAAAGCATGCATGTTTAGTGGAGAGTTACGGTTTAAGAGAAAAATGGGTTGTGATGCATGATGTGATCCACGACATGGCTTTATGGTTATATGGTGAATGTGGGAAGGAAAAGAACAAAATTTTAGTATACAATGATGTTTTTAGGCTGAAGGAAGCTGCAGAAATTTCAGAACTTAAAGAGACGGAGAAGATGTCATTGTGGGATCAGAATCTTGAGAAGTTCCCTGAAACATTGATGTGTCCCAATCTCAAGACTTTATTTGTGAGGAGATGTCATCAGTTGACGAAATTTTCGAGTGGATTCTTTCAATTTATGCCTCTAATTAGAGTTTTGAATTTGGCGTGCAATGATAATTTAAGTGAGTTACCTACTGGGATTGGTGAATTGAATGGCTTGAGATATCTTAATTTGTCATCCACAAGAATAAGAGAGTTGCCCATTGAGCTAAAAAATTTGAAAAAATTGATGATTTTGCATCTGAATTCTATGCAATCCCCTGTAACTATCCCACAAGACTTGATATCAAATCTCATATCTTTAAAGTTTTTCAGCCTGTGGAATACCAATATTTTAAGTGGAGTTGAAACCTTGCTTGAGGAGTTGGAGTCCTTGAATGACATCAATCAGATAAGAATCAACATATCTAGTGCTCTTTCATTGAACAAATTAAAGAGAAGCCACAAATTACAGAGGTGTATAAGCGATCTAGGGTTACATAATTGGGGGGATGTAATCACACTTGAACTATCATCTTCATTTTTAAAAAGAATGGAGCATTTAGGAGCGCTTCATGTACACGATTGCGATGATGTGAATATAAGTATGGAAAGAGAAATGACACAAAATGATGTTATTGGTCTCTCGAACTACAACGTTGCAAGGGAGCAATACTTTTATAGCCTTCGTTTCATAGTAATAGGAAATTGTTCAAAATTGTTAGACTTAACATGGGTTGTTTATGCTTCATGTCTAGAAGCACTTTATGTTGAAGATTGTGAATCAATAGAACTAGTACTACATGATGATCATGGAGCTTATGAAATTGTGGAAAAATTGGACATATTTTCAAGGCTCAAATACCTCAAGCTCAATAGACTGCCAAGATTGAAGAGCATCTACCAGCATCCTCTGCTCTTTCCCTCGCTTGAAATCATCAAGGTGTATGATTGCAAAAGCTTAAGGAGCCTCCCATTCGATTCCAACACTTCGAACAACAATCTTAAGAAAATTAAAGGAGAGACAAATTGGTGGAATCGGTTGAGGTGGAAAGATGAAACTATCAAGGACTCTTTTACTCCATATTTCCAAGTCGACAAAGCTGAAGCATATTTTGCAGAGGAGTCCGAAACTAGCAGCATAGATGATGATATGCAGGAACAGCTGGTATCAAATTAA 2754 0.4005 MEFLSSIVGLIPCFYDHTSKHTVYIRDLKQNLQALRKEMAELNNLYEDVKARVEGAEQRQMMRRKEVGGWICEVEVMVTEVQEILQKGDQEIQKRCLGCCPRNCWSSYKIGKAVSEKLVAVSGQIGKGHFDVVAEMLPRPLVDELPMEETVGSELAYGRICGFLKDPQVGIMGLYGMGGVGKTTLLKKIHNNFLPTSSDFDVVIWDVVSKPSNVEKIQKVLWNKLQLSRDGWECRSTKEEKAAEILRVLKTKKFVLLLDDIWERLDLLEMGVPHPDAQNKSKIVFTTRSQDVCRQMQAQKSIKVECLSSEAAWTLFQKKVGEETLKFHPHIPRLAKIVAEECKGLPLSLVTVGRAMVGEKDPSNWDKVIQDLSKFPAEISGMEDELFNRLKVSYDRLSDNAIKSCFIHCSLFSEDVVIRIETLIEQWIGEGLLGEVHDIYEARNQGHKIVKKLKHACLVESYGLREKWVVMHDVIHDMALWLYGECGKEKNKILVYNDVFRLKEAAEISELKETEKMSLWDQNLEKFPETLMCPNLKTLFVRRCHQLTKFSSGFFQFMPLIRVLNLACNDNLSELPTGIGELNGLRYLNLSSTRIRELPIELKNLKKLMILHLNSMQSPVTIPQDLISNLISLKFFSLWNTNILSGVETLLEELESLNDINQIRINISSALSLNKLKRSHKLQRCISDLGLHNWGDVITLELSSSFLKRMEHLGALHVHDCDDVNISMEREMTQNDVIGLSNYNVAREQYFYSLRFIVIGNCSKLLDLTWVVYASCLEALYVEDCESIELVLHDDHGAYEIVEKLDIFSRLKYLKLNRLPRLKSIYQHPLLFPSLEIIKVYDCKSLRSLPFDSNTSNNNLKKIKGETNWWNRLRWKDETIKDSFTPYFQVDKAEAYFAEESETSSIDDDMQEQLVSN* 918
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0490 917 Gene3D - 156 304 IPR027417 -
Vvi9g0490 917 Gene3D Ribonuclease Inhibitor 495 660 IPR032675 -
Vvi9g0490 917 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 33 855 - -
Vvi9g0490 917 PRINTS Disease resistance protein signature 248 262 - -
Vvi9g0490 917 PRINTS Disease resistance protein signature 603 619 - -
Vvi9g0490 917 PRINTS Disease resistance protein signature 171 186 - -
Vvi9g0490 917 PRINTS Disease resistance protein signature 342 356 - -
Vvi9g0490 917 Gene3D - 394 480 IPR036388 -
Vvi9g0490 917 Gene3D Ribonuclease Inhibitor 661 868 IPR032675 -
Vvi9g0490 917 FunFam Probable disease resistance protein At5g66910 306 393 - -
Vvi9g0490 917 Gene3D - 306 393 IPR042197 -
Vvi9g0490 917 Pfam Leucine rich repeat 534 595 IPR001611 GO:0005515
Vvi9g0490 917 FunFam Probable disease resistance protein At1g63360 394 481 - -
Vvi9g0490 917 FunFam Probable disease resistance protein At1g61300 133 301 - -
Vvi9g0490 917 Pfam NB-ARC domain 159 395 IPR002182 GO:0043531
Vvi9g0490 917 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 409 IPR027417 -
Vvi9g0490 917 Coils Coil 25 59 - -
Vvi9g0490 917 SMART AAA_5 168 303 IPR003593 GO:0016887
Vvi9g0490 917 SUPERFAMILY L domain-like 466 871 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi9g0490 Vvi-Chr9 4722409 4725162 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0490 172 412 WRKY Transcription Factor Family AT5G45050 25.410 1.03e-06 50.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0490 - K13459 vvi:100246379 1555.04