Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0476 ATGTTGCCTCGTCCTCCAGTTGATGAACTGCCAATGGAGGCGACTGTGGGCCCACAATTGGCGTATGAAAAGAGCTGTAGGTTTCTCAAAGATCCACAAGTGGGAATTATGGGATTGTATGGAATGGGGGGTGTTGGCAAAACCACCCTCTTGAAGAAAATCAACAATGAATTCCTCACAACATCCAATGACTTTGAGGTTGTGATTTGGGCTGTGGTGTCAAAATCGCCCGACATTGAAAAAATTCAGCAACTTATTTGGAATAAATTGGAAATCCCACGTGATAAATGGGAAACTAGAAGCAGTAGGGAGGAGAAGGCTGCAGAAATATTGAGAGTTCTAAAAAGAAAAAGGTTCATCTTGTTGTTGGATGACATTTGGGAGGGACTTGATCTCCTAGAAATGGGGGTCCTGCGTCCAGATACTGAAAATAAGTCCAAGATAGTTTTGACGACCCGATCACAGGATGTCTGCCACAAAATGAAAGCTCAGAAGAGTATAGAAGTGGAATGTTTGGAGTTAGAAGATGCCTGGACTTTGTTCCGGAAGGAGGTAGGAGAAGAGATATTAAATTCTCATCCGGATATACCGATGCTTGCAAAGGTTGTTGCTGAAGAGTGCAGAGGTTTACCTCTCGCTCTTGTCACTCTTGGGCGGGCCATGGCAGCTGAGAAAGATCCCTCAAACTGGGACAAGGTAATACAAGATCTACGCAAATCTCCAGCTGAAATCACAGGTATGGAAGATAAATTGTTTCATCGATTGAAACTCAGTTATGATAGGTTGCCTGACAATGCTAGCAAATCTTGTTTTATATATCATTCCATGTTCCGAGAGGACTGGGAGATTTATAATTTTCAACTTATAGAACTTTGGATAGGGGGGGGGGGGGGGGGGGGTTCTGGGGGAAAATTCTGGATTTAA 924 0.4351 MLPRPPVDELPMEATVGPQLAYEKSCRFLKDPQVGIMGLYGMGGVGKTTLLKKINNEFLTTSNDFEVVIWAVVSKSPDIEKIQQLIWNKLEIPRDKWETRSSREEKAAEILRVLKRKRFILLLDDIWEGLDLLEMGVLRPDTENKSKIVLTTRSQDVCHKMKAQKSIEVECLELEDAWTLFRKEVGEEILNSHPDIPMLAKVVAEECRGLPLALVTLGRAMAAEKDPSNWDKVIQDLRKSPAEITGMEDKLFHRLKLSYDRLPDNASKSCFIYHSMFREDWEIYNFQLIELWIGGGGGGGSGGKFWI* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0476 307 Gene3D - 171 263 IPR042197 -
Vvi9g0476 307 Gene3D - 20 169 IPR027417 -
Vvi9g0476 307 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 24 296 - -
Vvi9g0476 307 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 273 IPR027417 -
Vvi9g0476 307 FunFam Probable disease resistance protein At1g61300 2 166 - -
Vvi9g0476 307 SMART AAA_5 33 174 IPR003593 GO:0016887
Vvi9g0476 307 FunFam Probable disease resistance protein At5g66910 171 258 - -
Vvi9g0476 307 PRINTS Disease resistance protein signature 207 221 - -
Vvi9g0476 307 PRINTS Disease resistance protein signature 113 127 - -
Vvi9g0476 307 PRINTS Disease resistance protein signature 36 51 - -
Vvi9g0476 307 Pfam NB-ARC domain 30 260 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0476 Vvi-Chr9 4600081 4601004 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0476 34 290 WRKY Transcription Factor Family AT5G45050 26.038 1.86e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0476 - K13459 vvi:109123132 584.334