Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0455 ATGGGTGTGAGCTCAAACAGAGTGGAGGACTTCTCAAGCCATCATGAGACAAGTGTTAGGATGTCACCAGCATCAGCAGAGGCAGTAATGGTTGTGGCAATGCCACCAGTGGAGATACACAGAGTTTGCTTACCACCAAGCAAAACCACCTTTCAGAAACTCAGACAGAGGCTCTCTGAGATTTTCTTCCCAGATGACCCTCTCCACAGGTTCAAGAACCAGTCTTCCTTTACAAAACTGGTTCTGGCCCTCCAGTTCTTCTTTCCCATCTTCCACTGGGCACCCACTTACAGTTTAGCTCTTTTGAGGTCTGATATCATCTCTGGTCTCACCATTGCAAGCCTTGCAATCCCACAAGGAATTAGTTATGCAAAGCTTGCAAATTTGCCGCCCATTATTGGACTATATTCAAGCTTTGTGCCCCCATTGATATATTCTATTCTTGGGAGCTCTAGGCATCTTGCTGTCGGTCCAGTCTCGATAGCATCACTGGTCATGGGCACGATGCTAAATAACGCGGTTTCTTGCAGTGCAGATCCAATTCTGTATCTCAAATTGGCTTTCACTGCAACCTTCTTCGCTGGTTTGTTTCAGGCTGCTTTGGGTCTACTGAGGTTGGGGTTTATAATTGATTTCCTCTCAAAGGCAACTCTAGTTGGGTTCATGGCTGGTGCAGCAGTCATAGTATCTCTGCAACAACTGAAAGGGTTGCTCGGGATCGCCCATTTCACTACCAAGATGCAAATTGTCCCTGTTTTAACTTCTGTTTTCCAGCAGAGACATGAGTGGTCCTGGCAAACCATCGTAATGGGATTCGGCTTCCTAGCCTTTCTATTGATTACAAGGCAAATTAGCATGAGAAGGCCAAAACTTTTCTGGGTTTCAGCAGCTGCCCCACTGACATCAGTTATTCTCTCAACCCTTCTAGTCTTTCTCCTCAAGTCGAAACTTCATGGGATCTCAATTATTGGTCACTTACCAAAGGGTCTGAATCCACCTTCATCAAATATGCTATACTTCCATGGCTCTTATCTTGCAGTTGCTATCAAAACTGGCATTATAACTGGAATCCTATCTCTCACTGAAGGAATAGCAGTGGGAAGGACATTTGCTGCTCTGAGAAATTACCAAGTTGATGGCAACAAAGAAATGATGGCCATTGGTTTCATGAACATGGCTGGTTCTTGTTCTTCATGCTATGTAACCACAGGATCATTTTCCCGATCTGCTGTGAACTACAATGCTGGAGCACAAACAGCAGTCTCAAACATAATAATGGCATCAACGGTGCTTGTGACTCTGTTGTTTCTCATGCCACTGTTTCACTACACTCCCAATTTCATATTGGCTGCCATTATCATAACCGCTGTGATTGGGCTTATTGATTATGAGGCTGCATATAAATTGTGGAAAGTCGACAAGCTTGATTGCTTTGCTTGTTTGTGTTCCTTCTTTGGTGTGCTCTTCATTTCAGTTCCCCTGGGTCTTGCTATTGCGGTTGGAGTATCAGTATTCAAGGTTCTCTTGCATGTCACGAGGCCAAACACTATGGTATTAGGGAATATCCCAGGAACTCAAATATATCAAAATCCCAGCCGATACAGAGAAGCAATGAAGGTTCCTTCATTTCTTATACTTGCTGTGGAGTCTCCCATCTACTTTGCAAATTCCACTTACATACAAGAAAGGATACTAAGATGGGTCCGTGAGGAAGAAGAGCAGATACAAGCAAACAATGGGAATGCGCTGAAATGTGTAATTTTAGACATGACAGCTGTGACAGCAATAGACACAAGTGGTATTGACGTGATATGTGAACTCCGAAAGATGCTGGAGAAAAGATCACTTCAGTTTGTGTTGGCAAATCCCGCTGGAAATGTGATGGAAAAGCTACATCAGTCAAAAATATTGGATTCCTTTGGGTTGAATGGACTCTACCTGGCAGTTGGAGAAGCCGTGGCCGACATCTCCTCACTGTGGAAGGCTCAACCATGA 1995 0.4416 MGVSSNRVEDFSSHHETSVRMSPASAEAVMVVAMPPVEIHRVCLPPSKTTFQKLRQRLSEIFFPDDPLHRFKNQSSFTKLVLALQFFFPIFHWAPTYSLALLRSDIISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSILGSSRHLAVGPVSIASLVMGTMLNNAVSCSADPILYLKLAFTATFFAGLFQAALGLLRLGFIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIAHFTTKMQIVPVLTSVFQQRHEWSWQTIVMGFGFLAFLLITRQISMRRPKLFWVSAAAPLTSVILSTLLVFLLKSKLHGISIIGHLPKGLNPPSSNMLYFHGSYLAVAIKTGIITGILSLTEGIAVGRTFAALRNYQVDGNKEMMAIGFMNMAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMASTVLVTLLFLMPLFHYTPNFILAAIIITAVIGLIDYEAAYKLWKVDKLDCFACLCSFFGVLFISVPLGLAIAVGVSVFKVLLHVTRPNTMVLGNIPGTQIYQNPSRYREAMKVPSFLILAVESPIYFANSTYIQERILRWVREEEEQIQANNGNALKCVILDMTAVTAIDTSGIDVICELRKMLEKRSLQFVLANPAGNVMEKLHQSKILDSFGLNGLYLAVGEAVADISSLWKAQP* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0455 664 Gene3D STAS domain 513 658 IPR036513 -
Vvi9g0455 664 ProSitePatterns SLC26A transporters signature. 131 152 IPR018045 GO:0008271|GO:0008272
Vvi9g0455 664 Pfam Sulfate permease family 102 481 IPR011547 GO:0016020
Vvi9g0455 664 NCBIfam sulfate permease 89 652 IPR001902 GO:0016020|GO:0055085
Vvi9g0455 664 SUPERFAMILY SpoIIaa-like 538 654 IPR036513 -
Vvi9g0455 664 ProSiteProfiles STAS domain profile. 533 656 IPR002645 -
Vvi9g0455 664 FunFam Sulfate transporter 31 513 658 - -
Vvi9g0455 664 Pfam STAS domain 534 652 IPR002645 -
Vvi9g0455 664 CDD STAS_SulP_like_sulfate_transporter 534 649 - -
Vvi9g0455 664 PANTHER SULFATE TRANSPORTER 49 655 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0455 Vvi-Chr9 4318611 4323104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0455 1 664 Inorganic Solute Cotransporters AT3G15990 75.526 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0455 K17471 - vvi:100267000 1264.21