Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0454 ATGGACTTGGACAATCCTGGACCATGTGATTCCTCAGTACTTACAGAGCAAGATTTACATGTCTCCTCTGCCATTTGGGATGGAGAGGACCGTGGAGTGTTAAAATGTCATGAGCACACCAAGGAACTTAAAATGTGGAAGTTAACGGAAGCCCAAATCAAGTTAGTAGAGATGGCAGGATTTAAGCACTTGAGTATGATTACAGATATGTCTATAGATGCACCCCTCATATCAGCCCTTGTAGAGAGGTGGAGAAGAGAAACAAACAGTTTTCATATGAGGGTGGGGGAGATGACTATTACCCTTGAAGATGTTTTCTTGATACTTGGATTACCAATTGATGGTGATCCAGTTATAGGGGTTACATCTCATGCATGCGAGTCAATATGCAGGAAGTTGTTGGGAAATGTCCCAAGATCCGAGCACAGAAGTGGCAGAATGGTAAAGCTAAGCTGGTTAAGGGAGAGCTTCTCAAGGTGTCCTGAAGATGCATCTGAGGAACAGATTAAGCGATCCACCCGTGCTTACCTTCTATATCTTCTAGGTTGCACTATATTTTCCTCCAGCACAGGTAATAAGGTACCAGTAATGTACCTTCAATTCTTTGAGAATTTTGATGATACCAAAAGATATGCTTGGGGCGCAGCAGCATTGGCATACTTATATAGAGCCCTTGGAAATGCCTCACTTAATGGGCAAACCAGTATTTGTGGGAGTATTACACTACTTCAGTGTTGGAGTTATGAGCATCTAAAAGTTGGTCGACCAGCTCTTGAGAACTTTCATAAGTCTGCTCAAGACTTTCCTCGAGCTCTAAAATGGAGAAGGAAGCGAAAAGTTTATTCAAATAGCAAAAGTTTGTCTGTTTACCGTGAGGCACTGGACACTCTAGAATTGTCTGACGTTACCTTTCTTCCATATATAGATATGGATAATGCTCTTATACAGGAAGAAATGAGGAAACAGATGACTATAGGAAGGAGTTCCACCATGCTGATTTGTTTTGATAAAGCTGAACGACACCTCCCAGACCGTTGCTTGCGTCAATTTGGCATGCATCGATCACCGCCTACACCAGTCAAGCAGTGGAAAAGGAAATCACGTGATACTTATGAGAGTACAGATTTGTCTAAGAAGATGGCATCTGAGTTAAGGGAATGGAAGGGGCGTCGGAATCATATTATTAAGGATGATTTGGATGGAGATGAAAGCAGATATATGGACTGGTACTTAAATATAACTCGTAAACTCATAGGAAGGCCTTCTCCTCAACCCAACCCTGCAACTCAACAAGCACCACCTCCCTTATGCAATCCAACATCTCAAAAGTTGTCTCCTCCATCCACGACTACAACTCAACAAAGATCATCTCCTCTATCCAGCTCAACAATGCAAATACTGCCTTCTCCTATTCCCACTCTTACAACTCAACGCAGGCCATCTCCTGTAGTCTGCTCAACATCTGAACAGATGCTATCTCCTCTGCCCACCGCTGCAACCCAAACACTGTCTTCTATTCCAACCCCCATAATTCAGCAATCTTTATCTCCTCTTGCTGCCCCTACAACACAACAAATGCCATCTCCACTTCCCACCCATACAACTCAGCAAATGGCATCTGCCCCACTCACATCAATAACCCATCCGGCCCCTCCATCCAGCTCAACTACACAACAAATAGCATCTCCTCTACCAACCTTAGCAACTCAACAAGGGTCATCTCCTCTACCCAGCACAGCTACTGAACGAAGTTTTAATCCTAATGAATTGGAGTCAACTAAAATTTCATCTCTTCTCTCATCTGAGAATGCTAGAATGTCTGCTGCATTGCGGGAAATAGCTCACATTACAAATGACCTTTCCACTGAAGGCTTTGATTCCCAACAATTGCAATCACTTTTAAAGATCAAGGAATTGCTTCATGTGGGTTATGGTGATGAGACAGAAGTGGGTGTGGAAGTAGATCCTAGGAACAAAGAAGTGGTTAATGATGATGGGGATCCAGATCAGACTTTGTTGTCACAATTGCATTATTTGGCTACTGCTTGTGCAGAATCTTCACAAAATCCTGAACCCACTTTGGACGAAGACCCCTCACACATGCTTGCATCAACTGAAAATTTGTCTCAACCACCTGTTCAAATTCCTCTCACCTGGCCTGTCAATGGCATTTTAACCCTGGATTGGATGCATGACGTTATGTCTGCCTTTGAGTGGTCTTCATGGAATATCTCTCCCTCAGAATTCACTTCCATCTTGCCATCTTCTGTCTTTGATAGCCTCCTTAACTCTGCATCAAGGATTCTGCATAAGGAGCCAAATTGTGTGAGGATAGATTGTTTTGAGGAGGATTTAAGTGTGGTTATCGTTGGTGATATTTGTGGGAAACTGCATGATCTCATTTTCCTTCTGCAAGATGCTGGTTTTCCTTCACAAAACCGAATCTTTGTTTTCAATGGAGATTATATTGGTATTGGAGGGTGGGGTCTTGAGACATTTTTACTTCTATTGGCTTGGAAGGTCCTTCTGCCACATAGAGTATATTTACTTCGTGGAAATCATGAAACCAAGCTTTGCACATCTGAGTGTGGGTTTGAGGAGGAGGTGATGACGAAATATGGAGATCAAGGGAAGCATGTCTACCGTAGATGCTTAGACTGCTTTTCAAAACTTCCTTTGGCCTCAACAATAGCAGGGCGTGTTTATACAACTCATGGAGGTCTTTTTCGAAGCAGCAGTATATCCATTGCTCCACTAAGAAAGTCCCATAAAATGAAAGATTCAGAAGAGTCCAATCATGATGTTGAGATGCTGTCTCTGGGTTCTTTGGAAGAATTATCCAAAGCAAAGAGAACAATTCTAGATCCTCGAAGTTCAGGAACAAACTCAATACTTTGTGATGCATTGTGGTCAGATCCTTCAATGGAGTGTGGCCTTAAACCAAATTTACAGAGAGGCTGTGGCCTACTGTGGGGTCCTGATTGCACTGAGACCTTCTTAAAGAAGTCAAATTTAAAGTTGATTATCAGATCGCATGAAGGCCCTGATGCAAGGGAGAAACGAGAAGATCTTGGTAGAATGGATGAAGGGTATTCCATAGATCATGAAGTAGAATCAGGGAAACTAGTCACTCTATTCAGTGCTCCAGACTTTCCGCCGTCTCAGGTCACTTCTAGCTCAGGGGAAAGACTTAACAATAAAGGGGCATACATTGTTCTAGGGCCTCCTACTTTCGATGATCCAGTTTTCCACACCTTCAAAGCTGTGACTCTAGGAGCCAAGATTAGAAAAAATGAAGATAGTCAGGCAAATGAGAGGAAGAAACATAGAAAATCTGAAGTGTGTCGAAAGAGAGAACAGGAAACAGAGAAGAGTGTTAAACGACATCGTTATCGCAGCTGA 3402 0.4271 MDLDNPGPCDSSVLTEQDLHVSSAIWDGEDRGVLKCHEHTKELKMWKLTEAQIKLVEMAGFKHLSMITDMSIDAPLISALVERWRRETNSFHMRVGEMTITLEDVFLILGLPIDGDPVIGVTSHACESICRKLLGNVPRSEHRSGRMVKLSWLRESFSRCPEDASEEQIKRSTRAYLLYLLGCTIFSSSTGNKVPVMYLQFFENFDDTKRYAWGAAALAYLYRALGNASLNGQTSICGSITLLQCWSYEHLKVGRPALENFHKSAQDFPRALKWRRKRKVYSNSKSLSVYREALDTLELSDVTFLPYIDMDNALIQEEMRKQMTIGRSSTMLICFDKAERHLPDRCLRQFGMHRSPPTPVKQWKRKSRDTYESTDLSKKMASELREWKGRRNHIIKDDLDGDESRYMDWYLNITRKLIGRPSPQPNPATQQAPPPLCNPTSQKLSPPSTTTTQQRSSPLSSSTMQILPSPIPTLTTQRRPSPVVCSTSEQMLSPLPTAATQTLSSIPTPIIQQSLSPLAAPTTQQMPSPLPTHTTQQMASAPLTSITHPAPPSSSTTQQIASPLPTLATQQGSSPLPSTATERSFNPNELESTKISSLLSSENARMSAALREIAHITNDLSTEGFDSQQLQSLLKIKELLHVGYGDETEVGVEVDPRNKEVVNDDGDPDQTLLSQLHYLATACAESSQNPEPTLDEDPSHMLASTENLSQPPVQIPLTWPVNGILTLDWMHDVMSAFEWSSWNISPSEFTSILPSSVFDSLLNSASRILHKEPNCVRIDCFEEDLSVVIVGDICGKLHDLIFLLQDAGFPSQNRIFVFNGDYIGIGGWGLETFLLLLAWKVLLPHRVYLLRGNHETKLCTSECGFEEEVMTKYGDQGKHVYRRCLDCFSKLPLASTIAGRVYTTHGGLFRSSSISIAPLRKSHKMKDSEESNHDVEMLSLGSLEELSKAKRTILDPRSSGTNSILCDALWSDPSMECGLKPNLQRGCGLLWGPDCTETFLKKSNLKLIIRSHEGPDAREKREDLGRMDEGYSIDHEVESGKLVTLFSAPDFPPSQVTSSSGERLNNKGAYIVLGPPTFDDPVFHTFKAVTLGAKIRKNEDSQANERKKHRKSEVCRKREQETEKSVKRHRYRS* 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0454 1133 MobiDBLite consensus disorder prediction 519 589 - -
Vvi9g0454 1133 PRINTS Serine/threonine phosphatase family signature 816 843 IPR006186 GO:0016787
Vvi9g0454 1133 PRINTS Serine/threonine phosphatase family signature 786 813 IPR006186 GO:0016787
Vvi9g0454 1133 PRINTS Serine/threonine phosphatase family signature 886 912 IPR006186 GO:0016787
Vvi9g0454 1133 PRINTS Serine/threonine phosphatase family signature 947 974 IPR006186 GO:0016787
Vvi9g0454 1133 PRINTS Serine/threonine phosphatase family signature 1041 1057 IPR006186 GO:0016787
Vvi9g0454 1133 PRINTS Serine/threonine phosphatase family signature 849 873 IPR006186 GO:0016787
Vvi9g0454 1133 ProSitePatterns Serine/threonine specific protein phosphatases signature. 850 855 IPR006186 GO:0016787
Vvi9g0454 1133 SUPERFAMILY Metallo-dependent phosphatases 728 1091 IPR029052 -
Vvi9g0454 1133 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 670 1123 - -
Vvi9g0454 1133 MobiDBLite consensus disorder prediction 435 490 - -
Vvi9g0454 1133 MobiDBLite consensus disorder prediction 1098 1133 - -
Vvi9g0454 1133 MobiDBLite consensus disorder prediction 349 378 - -
Vvi9g0454 1133 SMART pp2a_7 753 1090 IPR006186 GO:0016787
Vvi9g0454 1133 MobiDBLite consensus disorder prediction 1097 1133 - -
Vvi9g0454 1133 Gene3D - 744 1132 IPR029052 -
Vvi9g0454 1133 MobiDBLite consensus disorder prediction 420 490 - -
Vvi9g0454 1133 Pfam Calcineurin-like phosphoesterase 786 1015 IPR004843 GO:0016787
Vvi9g0454 1133 Pfam Plant mobile domain 60 410 IPR019557 -
Vvi9g0454 1133 MobiDBLite consensus disorder prediction 362 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0454 Vvi-Chr9 4310334 4316264 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0454 716 1007 Calmodulin-binding Proteins AT5G63870 61.905 2.67e-122 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0454 - K04460 vvi:100251525 2216.04