Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0442 ATGCCTAGGAAAATTCAGAAGTCCCTTCAAGATTACCTCTCCAAGCTCAAAAAGCCCACCCCACATATCCAATTGTCTGCTAATAATGCTCTCTCGGCGTCGATAAATCGAATGCTATTAGGGTGTAAATACCCTAAAACGTTAATCGATGTTGATCGTGATCAAACAAACAGTCGTGGATCAGATCATGGCCATGCTGCCACACTCTCCGACATCGATCGCTTTCTTTTTGAGAATTTCAGGTCACTCTATCAGAAAAATGATGATGATGATGATGATGATGATGATACCAAGAAGCGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAACCAGGTGGGGTTTTGTTTGAATCACCGAGGATTATGGATCCTACATCGAATATTTGCAGCTGCCACAGATTTTTCACAACTCCTTGTTCTTCAAGTTCATTAATGGAGGATGCTAGGGCAAGCCTAGCAGTATCATCAGAGGGCATTGCCTCTAGCTATGCAACCAGTAGTACCAGTACTGTTGATTGTTCTTCATCTTCTTCCAATGATATTAAGGAAGTTTTAGCTCCCCATGACTGCATTGCAGTGTTGACGAATTCTCCGAATCCATACGTCGATTTTCGACTCTCCATGCAGGAGATGATCGAAGCCCGATTGCACAGCCATGAAAAGGTTGATTGGGATTTCATGGAGGATCTTCTCTTCTGTTACTTGAACCTCAACGATAAGGACTCGCACAAGTATATTTTACAGGCTTTTGTAGACCTAATCTGCGTTTTACGCCAAAAAACCGACAAAGTTTCGATGAATGCTCGAGGAGAAGGAGAATGGAGAAGGGAATGA 837 0.4229 MPRKIQKSLQDYLSKLKKPTPHIQLSANNALSASINRMLLGCKYPKTLIDVDRDQTNSRGSDHGHAATLSDIDRFLFENFRSLYQKNDDDDDDDDDTKKREEEEEEEEEEKPGGVLFESPRIMDPTSNICSCHRFFTTPCSSSSLMEDARASLAVSSEGIASSYATSSTSTVDCSSSSSNDIKEVLAPHDCIAVLTNSPNPYVDFRLSMQEMIEARLHSHEKVDWDFMEDLLFCYLNLNDKDSHKYILQAFVDLICVLRQKTDKVSMNARGEGEWRRE* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0442 278 MobiDBLite consensus disorder prediction 88 112 - -
Vvi9g0442 278 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 79 258 IPR038933 GO:0045892
Vvi9g0442 278 MobiDBLite consensus disorder prediction 85 119 - -
Vvi9g0442 278 Pfam Transcriptional repressor, ovate 198 257 IPR006458 -
Vvi9g0442 278 ProSiteProfiles OVATE domain profile. 194 257 IPR006458 -
Vvi9g0442 278 NCBIfam uncharacterized plant-specific domain TIGR01568 192 259 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0442 Vvi-Chr9 4189998 4190834 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vvi9g0442 Ovate 7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0442 - - vri:117922468 489.96