Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0426 ATGAATGCGTTGGGGAGGCAGGCGCAGAGATCTGGTGCATCGACGATGCATCAGAGGCAGTACTCCGAAAACTTCATAGATGCTTCGTCTAATGGGAGGTGGCTTCAATCTGCTGGTCTTCAGCACCTCCAGTCCTCCAATGCCTCCGTTCCTTCTCTTCAGGACTATGGGTACTATGGTGGTGGTGGAGGTGGAGGAGGAGGAGGAGGAGGAGGGGGGCAGGGGTCGAGAGTGTATAGGAGTATGCAGAGGGAGTTTGGTGGAGGGAATGAGTTTTACTCAGAGCCATCTACGCCGCCTTTAAATTCGAGGTCGATGGGTCAGAGGAAGACCGGTGAGGAGCAAGTTTCACCTAGTGAGTTCAGTCCTGGACTCCTAGATCTGCATTCTTTGGATACTGAGCTTCTTCCTGAGATGCCAGTTCATAGTCTTTATGATAGCACTTCCATGTATCATTCTGTACGGGGCAGAAGCTTTGATGACTCTGAGCCATACATCCCTGCCAACAAACAGGGTGGCAGAGCTCGTGGTTTGCCAGAGAACAACCTACTGAAAAGTTTTGCTGCTGATAAGGAGAAGGCCAGCTCTGTTGCGAAGATAAAAGTTGTGGTTCGCAAAAGACCATTAAATAAAAAGGAGTTAGCAAAGAATGAGGAGGACATTATAACTATTGATGCCAATTCTCTGACAGTTCATGAGACAAAACTTAAGGTTGATTTGACAGAATATGTGGAGAAGCATGAATTTTTTTTTGATGCAGTGTTGAATGAGGAGGTTTCAAATGATGAGGTCTATCGTGAGACTGTGGAGCCCATTGTTCCAATAATTTTTCAACGCACAAAAGCAACTTGCTTTGCATATGGGCAAACAGGGAGTGGAAAAACTTTTACTATGAAACCATTGCCACTTAAGGCGTCTCGGGATATCTTGAGATTGATGCACCACACTTACCGGAACCAAGGTTTTCAGTTGTTTGTAAGCTTCTTTGAAATTTATGGAGGAAAGCTTTTTGATCTCCTCAATGATCGGAAAAAACTTTGCATGAGAGAAGATGGTAAACAGCAAGTTTGCATTGTGGGTTTGCAAGAGTATAGAGTATCTGATGTGGAAACAATTAAAGAGCTCATTGAGAAAGGAAGTGCAACAAGAAGTACTGGTACAACTGGTGCAAATGAGGAGTCCTCCCGTTCACATGCCATACTTCAGCTTGCTATCAAGAGATCTGTTGATGGCAATGAATCAAAGCCTCCTCGTGTTGTTGGCAAGCTCTCCTTTATAGATCTTGCTGGGAGTGAACGTGGTGCGGATACAACAGATAATGATAAGCAGACAAGAATGGAAGGTGCTGAGATTAATAAAAGTTTGCTTGCATTGAAGGAATGCATAAGAGCACTTGACAATGATCAGGGTCATATTCCTTTTAGAGGCAGTAAACTAACTGAAGTTCTAAGAGATTCATTTGTTGGTGACTCACGTACGGTAATGATTTCATGCATTTCACCCAATGCTGGATCGTGTGAGCATACTCTCAACACCTTAAGATATGCCGACAGGGTGAAGAGCCTCTCCAAAGGCGGCAACTCTAAGAAGGATATATTGTCTTCAACCTTAAACCTAAAGGAATCAACAAACATGCCCCTATCTTCAGTTTTACCTGTTGTAACCACCTATGAAGATGACATGACTGATACATGGCCTGACCAAAATGAAAGAGACGAGTTTGATGTGTCAGAAGAGTCCTATGAGCAAGAGAAACCATCATGGAAGAATGGGAGGCTAGAGCCATACCATCTTTCTCATTCTGAAGACAAATTTAGGAAGGCCAATGGCCAGACAAAATGGAAGGAACAGCCAAAATTTGATACTAAGATCTCCCATTCAGATGATGATTTGAATGCCCTCTTACAGGAAGAGGAAGATCTTGTAAATGCTCACCGGAAACAAGTGGAGGAGACCATGAACATTGTTAGAGAGGAGATGAACCTGTTGGTCGAAGCAGATCAACCCGGGAATCAGCTGGATGACTATGTTTCTAGATTGAATTCAATACTATCCCAGAAGGCTGCTGGAATAATGCAGCTTCAAGCTCATTTGGCTCATTTTCAGAAGCGTCTGAAGGAGCATAATGTTTTAGTGTCTTCATATGGTCAATAA 2154 0.4359 MNALGRQAQRSGASTMHQRQYSENFIDASSNGRWLQSAGLQHLQSSNASVPSLQDYGYYGGGGGGGGGGGGGGQGSRVYRSMQREFGGGNEFYSEPSTPPLNSRSMGQRKTGEEQVSPSEFSPGLLDLHSLDTELLPEMPVHSLYDSTSMYHSVRGRSFDDSEPYIPANKQGGRARGLPENNLLKSFAADKEKASSVAKIKVVVRKRPLNKKELAKNEEDIITIDANSLTVHETKLKVDLTEYVEKHEFFFDAVLNEEVSNDEVYRETVEPIVPIIFQRTKATCFAYGQTGSGKTFTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVETIKELIEKGSATRSTGTTGANEESSRSHAILQLAIKRSVDGNESKPPRVVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPNAGSCEHTLNTLRYADRVKSLSKGGNSKKDILSSTLNLKESTNMPLSSVLPVVTTYEDDMTDTWPDQNERDEFDVSEESYEQEKPSWKNGRLEPYHLSHSEDKFRKANGQTKWKEQPKFDTKISHSDDDLNALLQEEEDLVNAHRKQVEETMNIVREEMNLLVEADQPGNQLDDYVSRLNSILSQKAAGIMQLQAHLAHFQKRLKEHNVLVSSYGQ* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0426 717 MobiDBLite consensus disorder prediction 87 124 - -
Vvi9g0426 717 Pfam Kinesin motor domain 205 521 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi9g0426 717 Coils Coil 635 666 - -
Vvi9g0426 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 522 IPR027417 -
Vvi9g0426 717 SMART kinesin_4 197 528 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi9g0426 717 ProSitePatterns Kinesin motor domain signature. 421 432 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vvi9g0426 717 MobiDBLite consensus disorder prediction 563 594 - -
Vvi9g0426 717 Gene3D Kinesin motor domain 180 525 IPR036961 -
Vvi9g0426 717 ProSiteProfiles Kinesin motor domain profile. 199 522 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi9g0426 717 FunFam Kinesin-like protein 181 525 - -
Vvi9g0426 717 MobiDBLite consensus disorder prediction 578 594 - -
Vvi9g0426 717 MobiDBLite consensus disorder prediction 1 23 - -
Vvi9g0426 717 PANTHER KINESIN-RELATED PROTEIN 6 30 585 IPR027640 GO:0003777|GO:0007018
Vvi9g0426 717 MobiDBLite consensus disorder prediction 95 118 - -
Vvi9g0426 717 CDD KISc_KIF2_like 199 520 - -
Vvi9g0426 717 PRINTS Kinesin heavy chain signature 422 440 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi9g0426 717 PRINTS Kinesin heavy chain signature 388 405 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi9g0426 717 PRINTS Kinesin heavy chain signature 279 300 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi9g0426 717 PRINTS Kinesin heavy chain signature 472 493 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0426 Vvi-Chr9 4065775 4072589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0426 199 522 Calmodulin-binding Proteins AT5G65930 35.629 4.42e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0426 K10393 - vvi:100248097 1377.07