Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0418 ATGTTCAAAAGATTCAAAGCTAAAGAGCTCGTTGGCCATGCTGGGGTAGATGAGTCCACCTGGCTCAAGCTCTTGTTAGGTTCAATCGGAATAGTTGAAGTTAGAGGAATATTCCATGGGAAGAACGGCCTAAGTAGGTTTAGAATGGAGAGAGGACTTGATAAATGGATGGTTGATTGCAGTTGTGGAGCCAAGGATGATGATGGGGAGAGAATGTCGCCCCATGACTGGTGTGGTGTGTGGAACCACAGTTGGTGTACTGAGATTTTAGACTATTGCAGTCCTTGCAAGGTTCATTTTTTGGAGATGGCTAACCTCATGTATCTTGGCTAA 333 0.4474 MFKRFKAKELVGHAGVDESTWLKLLLGSIGIVEVRGIFHGKNGLSRFRMERGLDKWMVDCSCGAKDDDGERMSPHDWCGVWNHSWCTEILDYCSPCKVHFLEMANLMYLG* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0418 110 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 1 91 - -
Vvi9g0418 110 SUPERFAMILY FYVE/PHD zinc finger 48 98 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0418 Vvi-Chr9 4016546 4016878 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0418 58 106 PHD Transcription Factor Family AT5G22260 33.333 5.58e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0418 - - vvi:100256176 142.895