Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0411 ATGGTGATAGGATCGTTGGTGGAGGAGAAGGATGCATCGGAAGCCATTAAGGAGAAGGGAAAAAAAAAGATGAAGAAAATACGCGCTCATACTCTAGGCGTAGGCCATTGCCGGAACTTTGAGAACAGGCTCCGGCCGAGAGCTGACCCTGCAATATCACCTTCCCATGCATTCGTGTTGAAGACAATCTACAGCGGTCCTTCTGTGTCAGACATAGCTTTTGCGACAAATGATGCCACTGCAACATCATTCGACAATCGCTACTTCATAGACACATTGAATGGAAGAGGGTTGCTGAAGATTGATTCTGATATTTCCAGAGATCCCAGGACACTTTCACATGTGGTGAGGTTTGGGATTAGCCTGGAGCAGCTCTTTGAGAGGTTCTCATATGGGTTTTCCAAGCTCTCAAACTACAAGGCTTTGGTAGGAGATGTGGGAAAGATTAGGAGGGACAGCAGGTTTAGTAATTGA 474 0.462 MVIGSLVEEKDASEAIKEKGKKKMKKIRAHTLGVGHCRNFENRLRPRADPAISPSHAFVLKTIYSGPSVSDIAFATNDATATSFDNRYFIDTLNGRGLLKIDSDISRDPRTLSHVVRFGISLEQLFERFSYGFSKLSNYKALVGDVGKIRRDSRFSN* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0411 157 SUPERFAMILY Heme-dependent peroxidases 29 157 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi9g0411 157 Pfam Peroxidase 29 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi9g0411 157 Gene3D - 138 152 - -
Vvi9g0411 157 ProSiteProfiles Plant heme peroxidase family profile. 29 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi9g0411 157 Gene3D Peroxidase, domain 2 29 137 - -
Vvi9g0411 157 PANTHER - 29 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0411 Vvi-Chr9 3960843 3961608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0411 29 157 Peroxidase AT2G37130 36.364 1.07e-22 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0411 K00430 - jre:109003691 171.4