Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0391 ATGATGGCTGGAAACCCTAACTGGTGGAGCATGAATAACATGCGACCACCCTCATCGCAGCAGTCTTCTTCTGCTTTCTTATCTCCCCCCACTCTCTTCTCTCCTAGATATGTACCTGAATCTTCTTCATCACTGCCTTTCAATTCTTTGGCTGACACCCCAGACCTTCCACACTCATGGAGCCAGCTACTTCTGGTTGGATCATCAGGTGAGGAAGATAGGTTTGGTTCAAGTGATTTTCAAGCTAAGAATGTGGAATGGGAAGACCAAATCTTGAATACATCCCAGAGGATTCCCGCAGTTGATGTAAAGCAAGAAGTAGTCTCTCAAAGTAGCCACCCCTATAATCATGGAGATGAAGGCTTTCAGACATCAAGACCTCCTTGGTCCCAAATCATGCCAGTTTCCTCTCCTAGGTCGTGCGTTACAAACTTGAGCACTAACATATTAGACTTCTCTAACAAGGCTGGTGTTAGGAATCAACATGCAGATCATTCAACTGAGTGTAACAGCACGGCGACTGGTGGGGCATGTAAAAAGGCTAGGGTTCAACCCTCTCCGAGCCAACCACCACTAAAGGTGAGAAAGGAGAAGCTGGGTGATAGAATAACAGCCCTTCACCAGTTAGTTTCCCCATTTGGAAAGACTGACACTGCTTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGGGTCAAATTGAGGCCCTTAGCTCTCCGTACTTGGGCAATGCATCAGGAAACATGAGGAACCAACAGTGTGTTCAAGGCGAAATGAATTGTATATTTCCCAAAGACCCTGGTCAGCTCCTGAACGACAACTGCCTCAAAAGAAAAGGATCAGCACCTAATCAGCAGGATACACAAGATGCACCAAAGGACTTGAAGAGTAGAGGGTTGTGCCTGGTTCCGGTTTCGTGCACTCAGCAGGTTGGAAGTGACAATGGAGCCGATTATTGGTCTCCGGCTCTCGGTGGAGGGTTTTGA 993 0.4683 MMAGNPNWWSMNNMRPPSSQQSSSAFLSPPTLFSPRYVPESSSSLPFNSLADTPDLPHSWSQLLLVGSSGEEDRFGSSDFQAKNVEWEDQILNTSQRIPAVDVKQEVVSQSSHPYNHGDEGFQTSRPPWSQIMPVSSPRSCVTNLSTNILDFSNKAGVRNQHADHSTECNSTATGGACKKARVQPSPSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNASGNMRNQQCVQGEMNCIFPKDPGQLLNDNCLKRKGSAPNQQDTQDAPKDLKSRGLCLVPVSCTQQVGSDNGADYWSPALGGGF* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0391 330 CDD bHLH_AtbHLH_like 193 240 IPR045239 -
Vvi9g0391 330 MobiDBLite consensus disorder prediction 163 192 - -
Vvi9g0391 330 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 193 243 IPR036638 GO:0046983
Vvi9g0391 330 FunFam Transcription factor bHLH123 family 193 256 - -
Vvi9g0391 330 Gene3D - 193 252 IPR036638 GO:0046983
Vvi9g0391 330 MobiDBLite consensus disorder prediction 1 27 - -
Vvi9g0391 330 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 183 232 IPR011598 GO:0046983
Vvi9g0391 330 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 45 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0391 Vvi-Chr9 3786505 3789151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0391 1 272 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 40.401 7.11e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0391 - - vvi:100248013 672.159