Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0367 ATGGATTGTGTGAGCCCAATCTTGGATGTTGTAACTCGCGTATGGGACTGCACAGCCAAGCATGCAGTCTACATCAGGGATCTGCAGGAAAATATGGACTCTTTAAGAAACGCAATGCAGGAGCTGAAGACTGTATATGAAGATGTGAAGGCAAGAGTTGATCTTGAAGAGCAACGGCAAATGAAGCGCATGAATGAAGTGGACGGCTGGCTCCATAGTGTACTAGACATGGAAATAAAAGTCAACGAGATCCTGGAGAAAGGCGATCAGGAAATCCAGAAGAAATGCCCTGGAACTTGTTGCCCCAGAAACTGCCGGTCCAGCTACAAGCTCGGGAAGAAAGCGAGTAAAAAGCTGGGTGATGTGACTGAATTAAGGAGCAAGGGACGCTTTGATGTTGTGGCTGATAGGTTATCTCAAGCTCCGGTGGATGAGAGACCGATGGAGAAGACTGTGGGCTTAGATCTGATGTTTACAGAGGTTTGCAGATGCATCCAACATGAGAAACTCGGAATTATTGGGTTGTACGGCATGGGGGGTGCCGGGAAAACTACCCTCATGACCAAAGTGAATAATGAGTTCATCAGAGCGAGCAAGATCTTTGAAATCGCCATCTGGGTTGTAGTATCCAGGCCTGCAAGCGTGGAAAAAGTACAAGAAGTCATTCGCAACAAATTAAACATTCCTGAAGACAGATGGAGAAACAGAACCGAGGATGAAAAGGCAGTAGAAATTTTTAATGTCTTGAAGGCAAAAAGGTTTGTGATGCTGCTAGATGATGTATGGGAGCGGCTTGATCTCCAAAAAGTGGGGGTTCCTTCTCCTAATTCCCAAAACAAGTCCAAAGTAATATTAACAACCCGTTCTCTGGATGTTTGTCGGGATATGGAAGCTCAAAAAAGCCTTAAGGTGAAGTGTTTGAGAGAAGATGAGGCTATTAATTTGTTCAAGAAGAAGGTTGGAGAGACTACTCTAAATTCACATTCGGATATACCCCAACTTGCTGAAATTGCTGCTAAAGAATGCCAAGGCTTACCACTTGCACTCATCACTATTGGGCGAGCTATGGCTGGCAAGAACACTCCACAAGAATGGGAGCGAGCAATCCAAATGTTGAAGGCTTATCCATCGAAGTTTTCAGGTATTCCCGATCATGTATTTTCGGTCCTCAAATTCAGTTACGATAACTTGTCAGATGACACCATCAAGACTTGTTTTTTATATCTTGCTATATTCCCAGAGGACCATCAAATTAAGGATAAGGATCTTATATTCCTTTGGATTGGAGAAGGGTTTTTGGATGGATTTGCTAGCATAGATGAAGCATTTAACCAAGGGCACCACATCATTGAGCATCTAAAGACAGTATGTCTATTCGAGAATGGTGGATTTAATAGGGTTAAAATGCATGATGTCATTCGTGATATGGCTTTATGGTTAGATTCAGAATATAGGGGCAATAAGAACATAATCTTGGTTGAAGAAGTTGATGCTATGGAAATTTACCAAGTTTCAAAGTGGAAAGAGGCACATCGGCTATACCTGTCGACAAGTAGTTTGGAAGAACTCACTATACCACCATCTTTTCCCAATCTCTTGACTTTAATTGCTCGGAGTAGAGGCTTGAAAAAATTTGAGAGTAGAGGCTTGAAAACATTAGAGAGTAGATTCTTCCATTTCATGCCGGTTATAAAAGTTCTGGACTTGTCAAATGCTGGAATAACTAAATTACCTACTGGAATTGGTAAATTAGTTACACTGCAATATCTCAATTTGTCAAAGACAAATCTAAAAGAATTGTCTGCGGAGCTTGCAACTTTGAAAAGACTAAGATGTCTGCTGTTAGATGGTAGTCTTGAAATAATTTTTAAGGAAGTAATATCACATCTCTCAATGTTGAGAGTTTTTAGCATAAGAATTAAATATATCATGTCAGATATTTCGTCACCCACAGACGAGGAGGAAGCCGATTATTCAAGGAAGGATGATAAGGCTATTTATTTACATGAGGATAATAAAGCATTATTAGAGGAGTTAGAAGGGTTGGAGCACATAAATTGGGTCTCTTTGCCCATTGTAGGTGCTCTGTCTTTCCAAAAGTTATTGAACTCCCAAAAATTACTGAATGCTATGAGGTATTTACACCTTTGGAACTTGGAAGGTATGAGGATGCTCCAATTGCCAAGAATCAAACATTTATGTACCCTTGCAATATGTAGATGTGGGGAGCTACAAGACATAAAAGTCAATCTAGAAAATGAGAGCGGTAGATGGGGATTTGTAGCAAATTATATCCCAAACTCAATTTTCTACAACCTCCGAAGTGTATTTGTTGATCAACTTCCAAAGTTGTTGGACTTGACATGGCTTATTTACATCCCAAGTCTTGAACTACTTTCTGTACATAGATGTGAATCCATGAAAGAAGTGATAGGTGATGCGAGTGAGGTCCCTGAAAATCTTGGCATATTCTCAAGACTTGAAGGTTTGACCTTGCATTACCTACCAAATCTAAGGAGCATCAGCAGACGAGCTTTGCCATTTCCTTCCTTGAAAACCCTCCGTGTGACGAAATGCCCAAACCTAAGGAAGCTGCCATTGGATTCAAACAGTGCAAGAAACAGTTTAAAGATAATTGAAGGGACATCAGAGTGGTGGCGAGGGTTGCAGTGGGAGGATGAAACCATTCAACTCACTTTCACTCCCTACTTAAATGCGATCCGGAGGAGAAATGAGAAGATGACCTTCTTCTCCCATCCTCTCGCAGGATAA 2772 0.4109 MDCVSPILDVVTRVWDCTAKHAVYIRDLQENMDSLRNAMQELKTVYEDVKARVDLEEQRQMKRMNEVDGWLHSVLDMEIKVNEILEKGDQEIQKKCPGTCCPRNCRSSYKLGKKASKKLGDVTELRSKGRFDVVADRLSQAPVDERPMEKTVGLDLMFTEVCRCIQHEKLGIIGLYGMGGAGKTTLMTKVNNEFIRASKIFEIAIWVVVSRPASVEKVQEVIRNKLNIPEDRWRNRTEDEKAVEIFNVLKAKRFVMLLDDVWERLDLQKVGVPSPNSQNKSKVILTTRSLDVCRDMEAQKSLKVKCLREDEAINLFKKKVGETTLNSHSDIPQLAEIAAKECQGLPLALITIGRAMAGKNTPQEWERAIQMLKAYPSKFSGIPDHVFSVLKFSYDNLSDDTIKTCFLYLAIFPEDHQIKDKDLIFLWIGEGFLDGFASIDEAFNQGHHIIEHLKTVCLFENGGFNRVKMHDVIRDMALWLDSEYRGNKNIILVEEVDAMEIYQVSKWKEAHRLYLSTSSLEELTIPPSFPNLLTLIARSRGLKKFESRGLKTLESRFFHFMPVIKVLDLSNAGITKLPTGIGKLVTLQYLNLSKTNLKELSAELATLKRLRCLLLDGSLEIIFKEVISHLSMLRVFSIRIKYIMSDISSPTDEEEADYSRKDDKAIYLHEDNKALLEELEGLEHINWVSLPIVGALSFQKLLNSQKLLNAMRYLHLWNLEGMRMLQLPRIKHLCTLAICRCGELQDIKVNLENESGRWGFVANYIPNSIFYNLRSVFVDQLPKLLDLTWLIYIPSLELLSVHRCESMKEVIGDASEVPENLGIFSRLEGLTLHYLPNLRSISRRALPFPSLKTLRVTKCPNLRKLPLDSNSARNSLKIIEGTSEWWRGLQWEDETIQLTFTPYLNAIRRRNEKMTFFSHPLAG* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0367 923 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 33 866 - -
Vvi9g0367 923 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 409 IPR027417 -
Vvi9g0367 923 FunFam Probable disease resistance protein At1g61300 134 301 - -
Vvi9g0367 923 Gene3D - 147 304 IPR027417 -
Vvi9g0367 923 FunFam Probable disease resistance protein At1g63360 394 479 - -
Vvi9g0367 923 Gene3D - 394 478 IPR036388 -
Vvi9g0367 923 FunFam Probable disease resistance protein At5g66910 306 393 - -
Vvi9g0367 923 Gene3D Ribonuclease Inhibitor 764 884 IPR032675 -
Vvi9g0367 923 SUPERFAMILY L domain-like 461 880 - -
Vvi9g0367 923 Coils Coil 590 610 - -
Vvi9g0367 923 Gene3D - 306 393 IPR042197 -
Vvi9g0367 923 Gene3D Ribonuclease Inhibitor 500 654 IPR032675 -
Vvi9g0367 923 Coils Coil 25 59 - -
Vvi9g0367 923 PRINTS Disease resistance protein signature 342 356 - -
Vvi9g0367 923 PRINTS Disease resistance protein signature 559 575 - -
Vvi9g0367 923 PRINTS Disease resistance protein signature 172 187 - -
Vvi9g0367 923 PRINTS Disease resistance protein signature 248 262 - -
Vvi9g0367 923 Pfam NB-ARC domain 167 396 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0367 Vvi-Chr9 3571186 3574796 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0367 148 477 WRKY Transcription Factor Family AT5G45050 27.628 1.05e-12 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0367 - K13459 vvi:100254908 1821.98