Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0363 ATGGATTGTGTGAGCCCAATCTTGGATGTTGTAACTCGCTTATGGGACTGCACAGCCAAGCACGCAGTCTCCATCAGGGATTTGCAGCAAAATATGGACTCTTTAAGAAACGCAATGCAGGAGCTGAGGGATGTACATGACGATGTAAACAGAAGAGTTGAACGTGAGGAGCAACGACAAATGAGGCGCACAAATGAAGTGAACGGCTGGCTCCATCGTGTACAAGTCATGGAAAAAGAAGTCAATGAGATTCTGCAGAAAGGCGATCAGGAAATCCAGAAGAAATGCATAGGAACTTCTTGTCCCAGAAACTGCCGGTCCAGATACAAGCTCGGGAAGAAAGCAAGTGAAATGTTCGGTGCTCTGACTGACTTAAGGAACAAAGGACGTTTTGATGTTGTGGCTGATAGTTTACCTCAAGCTCCAGTGGATGAGAGGCCGCTGGAGAAGACCGTGGGCTTAGATCTGATGTATGCAGAGGTTTGCAGATGCATCCAAGATGAACAACTGGGAATTATTGGATTGTATGGTATGGGGGGTGCCGGGAAAACTACCCTCATGACCAAAGTGAATAACGAATTCATCAGAGCAAGCAAGGACTTTGAAATTGCCATATGGGTTGTAGTATCCAGGCCTGCAAGTGTGGGAAAAGTACAAGAAGTCATTCGCAACAAGTTAGACATCCCGGATAATAGATGGAGAGACAGAGCTGGGTATGAAAAAGCAGTAGAAATTTTCAATGTCTTGAAGGCAAAAAGGTTCGTGATGTTGCTGGATGATGTATGGGAGCGGCTTGATCTCCATAAGGTGGGTGTTCCTCCTCCTGATTCCCAAAACAAGTCCAAAGTAATATTAACAACCCGATCTCTGGATGTTTGTCGTGATATGGAAGCTCAAAAAAGCATTAAGGTGGAGTGTTTGACAGAACAGGAGGCTATGAATTTGTTCAAGGAGAAGGTTGGAGAGACCACTCTAAATTCACATCCAGATATACCCCAGTTTGCCGAAATTGCTGCTAAAGAGTGCAAAGGTTTACCACTTGCACTCGTCACAATTGGGCGAGCTATGGCCAGGAAGAACACACCACAAGAATGGGAGCGAGCCATACAAATGTTGAAGACTTATCCGTCAAAGTTTTCAGGTATGGGAGATCATGTATTTCCGATCCTAAAATTCAGTTATGATAACTTGTCAGATGACACCATCAAGGCTTGTTTTTTGTATCTTGCTATATTCCGAGAGGACTATGAAATTAGAGATGATGATCTTATATTCCTCTGGATTGGAGAAGGGTTTTTGGATGAATGTGATAACATTGATGAAGCATTTAACCAAGGGCATGACATGATTGAGCATCTAAAGACAGCATGTCTATTTGAGAGTAGTGATGAATATTATCATAAGGTTAAAATGCATGATGTTATTCGTGATATGGCTTTGTGGTTATCTACAACATATAGTGGCAATAAGAACAAAATTTTGGTAGAAGAAAATAATACTGTGAAAGCTCACCGAATTTCAAAGTGGAAAGAAGCGCAAAGGATATCTTTTTGGACTAAAAGCCCTCTAGAACTCACTGTACCATTGTATTTTCCCAAACTCTTGACTTTAATTGTTAGGAGTAAAAGTGGTAACTTCCAAACATTTACTGATAGATTCTTTTCGAGTGGATTCTTCCATTTTATGCCGATTATAAAAGTTTTGGATTTGTCAGGTACCATGATAACTGAGTTACCAACTGGAATTGGTAATTTAGTTACACTAGAGTATCTCAATTTAACAGGTACATTAGTAACAGAATTGTCGGCGGAGCTTAAAACTTTGAAAAGAATAAGATATCTGGTATTAGATGATATGCCATATCTTCAAATAATTCCGAGTGAAGTAATATCAAATCTCTCAATGATGAGAATTTTTCTAGTAGGATTTAGTTATTCATTAGTGGAGGAAAAAGCTAGTCATTCACCCAAAGAGGAGGGACCCGATTATTCAAGGGAGGATTATGAAGCTCTTTACTTGTGGGAGAATAATAAAGCATTATTGGAGGAGTTGGAAGGGTTGGAACACATAAATTGGGTCTATTTTCCCATCGTAGGTGCTTTGTCTTTCCAAAAGTTATTAAGCTCCCAGAAACTACAGAATGTTATGAGGGGTCTAGGCCTTGGGAAATTGGAAGGCATGACCTCACTCCAATTGCCAAGAATGAAACATCTAGATAATCTTAAAATATGTGAATGTCGGGAGTTGCAAAAGATAGAAGTAGATCTGGAAAAGGAGGGAGGACAGGGATTTGTAGCAGATTATATGCCAGACTCGAATTTCTACAGCCTTCGCGAGGTCAATATTGATCAACTTCCAAAGTTGTTGGACTTGACATGGATTATTTACATCCCAAGTCTTGAACAACTTTTTGTACATGAATGTGAATCCATGGAAGAAGTGATAGGTGATGCGAGTGGGGTCCCTCAAAATCTTGGCATATTCTCAAGACTCAAAGGTTTGAACTTGCATAATCTACCAAATCTAAGGAGCATCAGTAGACGGGCCTTGTCATTTCCTTCCTTGAGATACCTCCAGGTGAGAGAATGCCCAAACCTAAGAAAGTTGCCATTAGATTCAAACAGTGCAAGAAACATGGAGAAGCTGCACTCCTTCCTTCTCCCACCCCTTTACCTGCTTTCTCCCATGCTCTCTCAGGAGAAGTTCCTGAAGAATACTTTGGCTCAGCTGAAACTCCTAGCAATTGTTGAATCACTGGATGCTTTGTGCGCATAG 2775 0.4094 MDCVSPILDVVTRLWDCTAKHAVSIRDLQQNMDSLRNAMQELRDVHDDVNRRVEREEQRQMRRTNEVNGWLHRVQVMEKEVNEILQKGDQEIQKKCIGTSCPRNCRSRYKLGKKASEMFGALTDLRNKGRFDVVADSLPQAPVDERPLEKTVGLDLMYAEVCRCIQDEQLGIIGLYGMGGAGKTTLMTKVNNEFIRASKDFEIAIWVVVSRPASVGKVQEVIRNKLDIPDNRWRDRAGYEKAVEIFNVLKAKRFVMLLDDVWERLDLHKVGVPPPDSQNKSKVILTTRSLDVCRDMEAQKSIKVECLTEQEAMNLFKEKVGETTLNSHPDIPQFAEIAAKECKGLPLALVTIGRAMARKNTPQEWERAIQMLKTYPSKFSGMGDHVFPILKFSYDNLSDDTIKACFLYLAIFREDYEIRDDDLIFLWIGEGFLDECDNIDEAFNQGHDMIEHLKTACLFESSDEYYHKVKMHDVIRDMALWLSTTYSGNKNKILVEENNTVKAHRISKWKEAQRISFWTKSPLELTVPLYFPKLLTLIVRSKSGNFQTFTDRFFSSGFFHFMPIIKVLDLSGTMITELPTGIGNLVTLEYLNLTGTLVTELSAELKTLKRIRYLVLDDMPYLQIIPSEVISNLSMMRIFLVGFSYSLVEEKASHSPKEEGPDYSREDYEALYLWENNKALLEELEGLEHINWVYFPIVGALSFQKLLSSQKLQNVMRGLGLGKLEGMTSLQLPRMKHLDNLKICECRELQKIEVDLEKEGGQGFVADYMPDSNFYSLREVNIDQLPKLLDLTWIIYIPSLEQLFVHECESMEEVIGDASGVPQNLGIFSRLKGLNLHNLPNLRSISRRALSFPSLRYLQVRECPNLRKLPLDSNSARNMEKLHSFLLPPLYLLSPMLSQEKFLKNTLAQLKLLAIVESLDALCA* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0363 924 FunFam Probable disease resistance protein At5g66910 306 393 - -
Vvi9g0363 924 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 33 870 - -
Vvi9g0363 924 Gene3D - 394 480 IPR036388 -
Vvi9g0363 924 Gene3D - 149 304 IPR027417 -
Vvi9g0363 924 PRINTS Disease resistance protein signature 172 187 - -
Vvi9g0363 924 PRINTS Disease resistance protein signature 248 262 - -
Vvi9g0363 924 PRINTS Disease resistance protein signature 342 356 - -
Vvi9g0363 924 PRINTS Disease resistance protein signature 850 866 - -
Vvi9g0363 924 SUPERFAMILY L domain-like 470 885 - -
Vvi9g0363 924 FunFam Probable disease resistance protein At1g63360 394 481 - -
Vvi9g0363 924 Pfam NB-ARC domain 167 396 IPR002182 GO:0043531
Vvi9g0363 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 409 IPR027417 -
Vvi9g0363 924 Gene3D - 306 393 IPR042197 -
Vvi9g0363 924 Gene3D Ribonuclease Inhibitor 818 888 IPR032675 -
Vvi9g0363 924 Coils Coil 25 59 - -
Vvi9g0363 924 FunFam Probable disease resistance protein At1g61300 134 301 - -
Vvi9g0363 924 Gene3D Ribonuclease Inhibitor 540 817 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0363 Vvi-Chr9 3523496 3527617 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0363 152 479 WRKY Transcription Factor Family AT5G45050 26.347 7.14e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0363 - K13459 vvi:100258314 1719.9