Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0361 ATGACCAAAGTGAATAATGAGTTCATCAGAGCGAGCAAGATCTTTGAAATCGCCATTTGGGTAGTAGTATCCAGGCCAGCAAGTGTGGAAAAAGTACAAGTCATTCGCAACAAGTTAGACATTCCTGAAGACAGATGGAGAAACAGAACCGAGGATGAAAAGGCAGTAGCAATTTTCAATGTCTTGAAGGCAAAAAGGTTAGTGATGCTGCTAGATGATGTATGGGAGCGGCTTCATCTCCAAAAAGTTGGGGTTCCTTCTCCTAATTCCCAAAACAAGTCTAAAGTAATATTAACAACCCGTTCTCTGGATGTTTGTCGGGCTATGGAGGCTCAAAAAAGCCTCAAGGTGGAGTGTTTGACAGAAGATGAGGCTATTAATTTGTTCAAGAAGAAGGTTGGAGAGACTACTCTAAATTCACATTCGGATATACCCCAACTTGCTGAAATTGCTGCTAAAGAATGCCAAGGCTTACCACTTGCAATCGTCACTATTGGGAGAGCTATGGCTGACAAGAAGACTCCACAAGAATGGGAGCGAGCAATACAAATGTTGAGGACTTACCCATCAAAGTTTTCAGGTATGGGAGATCATGTATTTCCGGTCCTCAAATTCAGTTATGATAACTTGACAAATGACACCATCAAGACTTGTTTTTTACATCTTGCTATATTCCCAGAGGACCATCAAATTTTGAATCAGGATCTTATATTCCTTTGGATTGGAGAAGGGTTTTTGGATGGATTTGCTAGCATAGATGAAGCATTTAACCAAGGGCACCACATCATTGAGCATCTAAAGACAGTATGTCTATTCGAGAATGATGGATTTGATAGGGTTAAAATGCATGATGTCATTCGTGATATGGCTTTATGGTTAGCTTCAGAATATAGGGGCAATAAGAACATAATCTTGGTAGAAGAAGTTGATACTTTGGAAGTTTACCAAGTTTCAAAGTGGAAAGAGGCACATCGGCTATACCTGTCAACTAGTTTGGAAGAACTCACTATACCACTATCTTTTCCCAATCTCTTGACTTTAATTGTTGGGAATGAAGACCTGGAAACATTTCCAAGTGGATTCTTCCATTTCATGCCGGTTATAAAAGTTTTGGATTTGTCAAATACTGGAATAACTAAATTACCTGCTGGAATTGGTAAATTAGTTACACTACAATATCTCAATTTTTCAAATACAGATCTAAGAGAATTGTCTGTGGAGCTTGCGACTTTGAAAAGACTAAGATATCTGATATTAGATGGTAGTCTTGAAATAATTTCTAAGGAAGTAATATCACATCTCTCAATGTTGAGAGTTTTTAGCACAATATTTAAATATCTCTTGTCAAAAAGAAATTATATTTCAAATGACAGAATGGTGGAGAGAAGTTGCACTTCTTCCCTCTCCCACCCATTTACTTGCTTCTCCCACGCTCTCTCAGGATAA 1446 0.3831 MTKVNNEFIRASKIFEIAIWVVVSRPASVEKVQVIRNKLDIPEDRWRNRTEDEKAVAIFNVLKAKRLVMLLDDVWERLHLQKVGVPSPNSQNKSKVILTTRSLDVCRAMEAQKSLKVECLTEDEAINLFKKKVGETTLNSHSDIPQLAEIAAKECQGLPLAIVTIGRAMADKKTPQEWERAIQMLRTYPSKFSGMGDHVFPVLKFSYDNLTNDTIKTCFLHLAIFPEDHQILNQDLIFLWIGEGFLDGFASIDEAFNQGHHIIEHLKTVCLFENDGFDRVKMHDVIRDMALWLASEYRGNKNIILVEEVDTLEVYQVSKWKEAHRLYLSTSLEELTIPLSFPNLLTLIVGNEDLETFPSGFFHFMPVIKVLDLSNTGITKLPAGIGKLVTLQYLNFSNTDLRELSVELATLKRLRYLILDGSLEIISKEVISHLSMLRVFSTIFKYLLSKRNYISNDRMVERSCTSSLSHPFTCFSHALSG* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0361 481 PANTHER DISEASE RESISTANCE PROTEIN RP 15 451 IPR044974 GO:0006952
Vvi9g0361 481 Gene3D - 207 289 IPR036388 -
Vvi9g0361 481 FunFam Probable disease resistance protein At5g66910 119 206 - -
Vvi9g0361 481 Gene3D - 120 206 IPR042197 -
Vvi9g0361 481 Gene3D Ribonuclease Inhibitor 290 474 IPR032675 -
Vvi9g0361 481 Gene3D - 2 119 IPR027417 -
Vvi9g0361 481 PRINTS Disease resistance protein signature 61 75 - -
Vvi9g0361 481 PRINTS Disease resistance protein signature 363 379 - -
Vvi9g0361 481 PRINTS Disease resistance protein signature 155 169 - -
Vvi9g0361 481 SUPERFAMILY L domain-like 281 442 - -
Vvi9g0361 481 FunFam Probable disease resistance protein At1g63360 207 292 - -
Vvi9g0361 481 FunFam Probable disease resistance protein At1g61300 1 114 - -
Vvi9g0361 481 Pfam NB-ARC domain 2 209 IPR002182 GO:0043531
Vvi9g0361 481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 222 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0361 Vvi-Chr9 3483757 3497071 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0361 62 290 WRKY Transcription Factor Family AT5G45050 28.696 3.82e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0361 - K13459 vvi:104880301 803.897