Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0359 ATGGATTGTGTGAGCCCAATCTTGGATGTTGTAACTCGCGTGTGGGACTGCACAGCCAAGCATGCAGTCTACATCAGGGATCTACAGGAAAATATGGACTCTTTAAGAAACGCAATGCAGGAGCTGAAGAATGTACATGAAGATGTGAAGGGAAGAGTTGAACTTGAAGAGCAACGGCAAATGAGGCGCACGAATGAAGTGGACGGCTGGCTCCATGGTGTACTAGCCATGGAAATACAAGTCAACGAGATCCTGGAGAAAGGCGATCAGGAAATCCAGAAGAAATGCCCTGGAACTTGTTGCCCCAGAAACTGCCGGTCCAGCTACAAGCTCGGGAAGAAAGCGACTAAAAAGCTGGGTGCTGTGATTGAATTAAGGAACAAGGGACGCTTTGATGTTGTGGCTGATAGGTTACCTCAAGCTCCGGTGGATGAGAGGCCGATGGAGAAGACTGTGGGCTTAGATCTGATGTTTACAGGGGTTTGCAGATACATCCAAGATGAGGAACTCGGAATTATTGGGTTGTACGGTATGGGGGGTGCCGGGAAAACTACCCTCATGACCAAAGTGAATAATGAGTTCATTAGATCGAGCAAGAGCTTTGAAATCGCCATTTGGGTTGTAGTATCCAGGCCAGCAAGTGTGGAAAAAGTACAAGACGTCATTCGGAACAAGTTAGACATCCCGGATGATAGATGGAGAAACAGAACTGAGGATGAAAAAGCAGTAGCAATTTTCAATGTCTTGAAGGCAAAAAGGTTTGTGATGCTGCTAGATGATGTATGGGAGCGGCTTGATCTCCAAAAAGTGGGGGTTCCTTCTCCTAATTCCCAAAACAAGTCCAAAGTAATATTAACAACCCGTTCTCTGGATGTTTGTCGGGATATGGAAGCTCAAAAAAGCCTTAAGGTGGAGTGTTTGACAGAAGATGAGGCTATTAATTTGTTCAAGAAGAAGGTTGGAGAGACTACTCTAAATTCACATTCGGATATACCCCAACTTGCTGAAATTGCTGCTAAAGAATGCCAAGGCTTACCACTTGCAATCGTCACTATTGGGCGAGCTATGGCTGACAAGAAGACTCCACAAGAATGGGAGCGAGCAATCCAAATGTTGAAGACTTATCCATCAAAGTTTTCAGGTATGGGAGATCATGTATTTCCGGTCCTCAAATTCAGTTACGATAACTTGCCAAACGACACCATCAGGACTTGTTTTTTATATCTTGCTATATTCCCAGAGGACCATGAAATTTGGGATGAGGATCTTATATTCCTTTGGATTGGAGAAGGGTTTTTGGATGGATTTGCTAGCATAGATGAAGCATTAAACCAAGGGCACCACATCATTGAGCATCTAAAGACAGTATGTCTATTCGAGAATGGTCTATTTGATAGGGTTAAAATGCATGATGTCATTCGTGATATGGCTTTATGGTTAGCTTCAGAATATAGGGGCAATAAGAACATAATCTTGGTAGAAGAAGTTGATACTGTGGAAGTTTACCAAGTTTCAAAGTGGAAAGAGGCACATCGGCTACACCTGGCGACAAGTAGTTTGGAAGAACTCACTATACCACCATCTTTTCCCAATCTCTTAACTTTAATTGTTAGGAGTAGAGGCCTGGAAACATTTCCGAGTGGATTCTTCCATTTCATGCCAGTTATAAAAGTTCTGGATTTGTCAAATTCTGGAATAACTAAATTACCTACTGGAATCGAAAAATTAATTACACTGCAATATCTCAATTTGTCAAATACAACTCTAAGAGAATTGTCCGCGGAGTTTGCGACTTTGAAAAGACTAAGATATCTGATATTAAATGGTAGTCTTGAAATAATTTTTAAGGAAGTAATATCACATCTCTCAATGTTGAGAGTTTTTAGTATAAGATCTACATATCACTTGTCAGAAAGAAATGATATTTCGTCATCCACAGAGGAGGAGGAGGAGGAGGAAGCCAATTATTCAAGGAAGGATGATAAGGCTATTTATTTACATGAGGATAATAAAGCATTATTAGAGGAGTTAGAAGGGTTGGAGCACATAAATTGGGTCTCTTTGCCCATTGTAGGTACTCTGTCTTTCCAAAAGTTATTGAACTCCCAAAAACTACTGAATGCTATGAGAGATTTAGACCTTTGGAACTTGGAAGGTATGAGCATACTCCAATTGCCAAGAATCAAACATCTACGTAGCCTTACAATATATAGATGTGGGGAGCTACAAGACATAAAAGTCAATCTAGAAAATGAGAGGGGTAGACGGGGATTTGTAGCAGATTATATCCCTAACTCAATTTTCTACAACCTCCTCTCAGTACAGGTTCATCTACTTCCAAAGTTGTTGGACTTGACATGGCTTATTTACATCCCAAGTCTTAAACATCTTGGTGTATATCACTGTGAATCCATGGAAGAAGTGATAGGTGATGCGAGTGGGGTCCCTGAAAATCTTAGCATATTCTCAAGACTCAAAGGTTTGTACTTGTTTTTTGTACCAAATCTAAGGAGCATCAGCAGACGAGCTTTGCCATTTCCTTCCTTGGAAACCCTCATGGTGAGGGAATGCCCAAACCTAAGGAAGCTGCCATTGGATTCAAACAGTGCAAGAAACAGTTTAAAGACAATTGACGGGACATCAGAAGAAGCTGCACTCCTTCCCTTTCCCACCCTTTTACCTGCTTCTCCCATGTACGCTCTCTCAGGACAAGTCTTTGAAGAATACTTGACTCAGCTGAAACTCCTCGCAATTGTTGGATCACTGGATGCTTTGTGTGCATAG 2784 0.4159 MDCVSPILDVVTRVWDCTAKHAVYIRDLQENMDSLRNAMQELKNVHEDVKGRVELEEQRQMRRTNEVDGWLHGVLAMEIQVNEILEKGDQEIQKKCPGTCCPRNCRSSYKLGKKATKKLGAVIELRNKGRFDVVADRLPQAPVDERPMEKTVGLDLMFTGVCRYIQDEELGIIGLYGMGGAGKTTLMTKVNNEFIRSSKSFEIAIWVVVSRPASVEKVQDVIRNKLDIPDDRWRNRTEDEKAVAIFNVLKAKRFVMLLDDVWERLDLQKVGVPSPNSQNKSKVILTTRSLDVCRDMEAQKSLKVECLTEDEAINLFKKKVGETTLNSHSDIPQLAEIAAKECQGLPLAIVTIGRAMADKKTPQEWERAIQMLKTYPSKFSGMGDHVFPVLKFSYDNLPNDTIRTCFLYLAIFPEDHEIWDEDLIFLWIGEGFLDGFASIDEALNQGHHIIEHLKTVCLFENGLFDRVKMHDVIRDMALWLASEYRGNKNIILVEEVDTVEVYQVSKWKEAHRLHLATSSLEELTIPPSFPNLLTLIVRSRGLETFPSGFFHFMPVIKVLDLSNSGITKLPTGIEKLITLQYLNLSNTTLRELSAEFATLKRLRYLILNGSLEIIFKEVISHLSMLRVFSIRSTYHLSERNDISSSTEEEEEEEANYSRKDDKAIYLHEDNKALLEELEGLEHINWVSLPIVGTLSFQKLLNSQKLLNAMRDLDLWNLEGMSILQLPRIKHLRSLTIYRCGELQDIKVNLENERGRRGFVADYIPNSIFYNLLSVQVHLLPKLLDLTWLIYIPSLKHLGVYHCESMEEVIGDASGVPENLSIFSRLKGLYLFFVPNLRSISRRALPFPSLETLMVRECPNLRKLPLDSNSARNSLKTIDGTSEEAALLPFPTLLPASPMYALSGQVFEEYLTQLKLLAIVGSLDALCA* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0359 927 Gene3D - 306 393 IPR042197 -
Vvi9g0359 927 Gene3D Ribonuclease Inhibitor 647 888 IPR032675 -
Vvi9g0359 927 SUPERFAMILY L domain-like 461 878 - -
Vvi9g0359 927 Pfam Leucine rich repeat 556 609 IPR001611 GO:0005515
Vvi9g0359 927 Pfam NB-ARC domain 167 396 IPR002182 GO:0043531
Vvi9g0359 927 FunFam Probable disease resistance protein At1g63360 394 479 - -
Vvi9g0359 927 Gene3D - 156 304 IPR027417 -
Vvi9g0359 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 409 IPR027417 -
Vvi9g0359 927 FunFam Probable disease resistance protein At5g66910 306 393 - -
Vvi9g0359 927 FunFam Probable disease resistance protein At1g61300 134 301 - -
Vvi9g0359 927 PRINTS Disease resistance protein signature 551 567 - -
Vvi9g0359 927 PRINTS Disease resistance protein signature 248 262 - -
Vvi9g0359 927 PRINTS Disease resistance protein signature 342 356 - -
Vvi9g0359 927 PRINTS Disease resistance protein signature 172 187 - -
Vvi9g0359 927 Coils Coil 25 59 - -
Vvi9g0359 927 Gene3D Ribonuclease Inhibitor 481 646 IPR032675 -
Vvi9g0359 927 Gene3D - 394 478 IPR036388 -
Vvi9g0359 927 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 33 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0359 Vvi-Chr9 3474831 3478940 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0359 166 614 WRKY Transcription Factor Family AT5G45050 24.948 5.86e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0359 - K13459 vvi:104880301 1726.06