Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0339 ATGGCACACCCCTTTGAAGCTCACCACATCCTCAACCTCTGCGCTCCCTGTGATTCCATCCGTCCGCCCAACGTATCCGGCAAAAGGCCAGCAAGTTCATTTAGCCAGAATGGGAATTCCAACTCCAGAAATGGCGAAGCTCCCATCCCAGTGTGCCCCAATTCCTCCCTCGCCGCCGGTGGTTCCGGAGTACCAACCTGTGTGGGGAAAGATAACAAAAAGGTGTCTTGGGGACGAAGCTCGGACGTGGGAAAACGGTCGGGAATGGAGGATAGTTTAGCCATTGTCCCTGGGTTTATGTCACTGTCTTGCAAGCAGGTCGGTGGATGCACCGCGCCGGAGTGCACTTACGCCGCTGAGGACTCGCCAGTGCACTTCTTTGGCCTCTACGATGGCCATGGAGGCCCTCAGGTGAGTTGCTATTGTGCAAGGATGCTTCATGAAATGGTTGCAGAAGAGTGGGAAAGAGGAGGTGGTGATGAATGGAGTAAATGGTGGGAGGTTGCATTACGTAGGGCCTATGGGAGGGCAGATGATGCTTTAAAAGACAGGGCATTAGCGCCATACTCAGTGGGATCAACCAGTTTGGTGGTGGTTGTGTCACCCTGTCAGATCATTGCTGCCAACTGTGGAGATTCTAGGGCTGTGCTTTGCCGTGGGACTCAAGCAATTCCCTTAACTGTTGACCACAAGCTTGATCGACAAGATGAACTGGCGCGAATTGAGGAAGCAGGCGGCCAAATTCTATATTGGCAGGGTCCAAGGGTAGAAGGAGTTCTTTCTATGACAAGAGCAATAGAGCCTGAAGTTACTTTCACAACAAGGAGTGATGAGGATGAATGTCTGATTTTGGCAAGTGATGGCTTATGGGATGTCCTGTCTAATGAACAGGTGGTAAAGGTTGCTCGCAATTCACTGAGGGAGGAGCGCAGGAAGGCTCTGCTTAATGATAGTTCACTACCCCCAGCCCACTCTGCTGCAGATAGTCTCCTTTGCTGTGCACTTGCTGAGTACAGTGATGACAACATTTCAATTATTGTTGTCGACCTGAAATCACGAAAGAGAAGGCACCAATATAGGCACTGA 1086 0.5101 MAHPFEAHHILNLCAPCDSIRPPNVSGKRPASSFSQNGNSNSRNGEAPIPVCPNSSLAAGGSGVPTCVGKDNKKVSWGRSSDVGKRSGMEDSLAIVPGFMSLSCKQVGGCTAPECTYAAEDSPVHFFGLYDGHGGPQVSCYCARMLHEMVAEEWERGGGDEWSKWWEVALRRAYGRADDALKDRALAPYSVGSTSLVVVVSPCQIIAANCGDSRAVLCRGTQAIPLTVDHKLDRQDELARIEEAGGQILYWQGPRVEGVLSMTRAIEPEVTFTTRSDEDECLILASDGLWDVLSNEQVVKVARNSLREERRKALLNDSSLPPAHSAADSLLCCALAEYSDDNISIIVVDLKSRKRRHQYRH* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0339 361 ProSiteProfiles PPM-type phosphatase domain profile. 76 350 IPR001932 -
Vvi9g0339 361 SMART PP2C_4 65 348 IPR001932 -
Vvi9g0339 361 SUPERFAMILY PP2C-like 72 352 IPR036457 -
Vvi9g0339 361 PANTHER PROTEIN PHOSPHATASE 52 350 IPR015655 GO:0004722|GO:0006470
Vvi9g0339 361 ProSitePatterns PPM-type phosphatase domain signature. 126 134 IPR000222 GO:0043169
Vvi9g0339 361 MobiDBLite consensus disorder prediction 26 47 - -
Vvi9g0339 361 CDD PP2Cc 78 350 IPR001932 -
Vvi9g0339 361 Pfam Protein phosphatase 2C 112 334 IPR001932 -
Vvi9g0339 361 MobiDBLite consensus disorder prediction 25 47 - -
Vvi9g0339 361 Gene3D - 65 359 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0339 Vvi-Chr9 3262202 3276089 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0339 77 355 PP2C-type Phosphatase Gene Family AT4G26080 44.481 6.88e-76 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0339 K14497 - vvi:100258395 715.301