Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0332 ATGGCACACCCCTTTGAAGCTCACCACATCCTCAACCTCCGCGCTCCCTGTGATTCCATCCGTCCGCCCAACGTATCCGGCAAAAGGCCAGCAAGTTCATTTAGCCAGAATGGGAATTCCAACTCCAGAAATGGCGAAGCTCCCATCCCAGTGTGCTCCAATTCCTCCCTCGCCGCCGGTGGTTCCGGAGTACCAACCTGTGTGGGGAAAGATAACAAAAAGGTGTCTTGGGGACGAAGCTCGGACGTGGGAAAACGGTCGGGAATGGAGGATAGTTTAGCCATTGTCCCTGGGTTTATGTCACTGTCTTGCAAGCAGGTCGGTGGATGCACCGCGCCGGAGTGCACTTACGCCGCTGAGGACTCGCCAGTGCACTTCTTTGGCCTCTACGATGGCCATGGAGGCCCTCAGGTGAGTTGCTATTGTGCAAGGATGCTTCATGAAATGGTCGCAGAAGAGTGGGAAAGAGGAGGTGGTGATGAATGGAGTAAACGGTGGGAGGTTGCATTACGTAGGGCCTATGGGAGGGCAGATGATGCTTTAAAAGACAAGGCATTAGCACCATACTCAGTGGGATCAACCAGTTTGGTGGTGGTTGTGTCACCCTGTCAGATCATTGCTGCCAACTGTGGAGATTCTAGGGCTGTGCTTTGCCGTGGGACTCAAGCAATTCCCTTAACTGTTGACCACAAGCTTGATCGACAAGATGAACTGGCCCGAATTGAGGAAGCAGGCGGCCAAATTCTATATTGGCAGGGTCCAAGGGTAGAAGGAGTTCTTTCTATGACAAGAGCAATAGGTGACCACTATCTGAAACCATGGATTATTTCAGAGCCTGAAGTTGCTTTCACAACAAGGAGTGATGAGGATGAATGTCTGATTTTGGCAAGTGATGGCTTATGGGATGTCCTGTCCAATGAACAGGTGGTAAAGGTTGCTCGCAATTCACTGAGGGAGGAGCGCAGGAAGGCTCTGCTTAATGATAGTTCACTACCCCCAGCCCACTCTGCTGCAGATAGTCTCCTTTGCTGTGCACTTGCTGAGTACAGTGATGACAACATTTCAATTATTGTTGTCGACCTGAAATCACGAAAGAGAAGGCACCAATATAGGCACTGA 1119 0.5085 MAHPFEAHHILNLRAPCDSIRPPNVSGKRPASSFSQNGNSNSRNGEAPIPVCSNSSLAAGGSGVPTCVGKDNKKVSWGRSSDVGKRSGMEDSLAIVPGFMSLSCKQVGGCTAPECTYAAEDSPVHFFGLYDGHGGPQVSCYCARMLHEMVAEEWERGGGDEWSKRWEVALRRAYGRADDALKDKALAPYSVGSTSLVVVVSPCQIIAANCGDSRAVLCRGTQAIPLTVDHKLDRQDELARIEEAGGQILYWQGPRVEGVLSMTRAIGDHYLKPWIISEPEVAFTTRSDEDECLILASDGLWDVLSNEQVVKVARNSLREERRKALLNDSSLPPAHSAADSLLCCALAEYSDDNISIIVVDLKSRKRRHQYRH* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0332 372 FunFam Protein phosphatase 2C 51 69 369 - -
Vvi9g0332 372 SMART PP2C_4 65 359 IPR001932 -
Vvi9g0332 372 MobiDBLite consensus disorder prediction 19 47 - -
Vvi9g0332 372 SUPERFAMILY PP2C-like 72 363 IPR036457 -
Vvi9g0332 372 ProSitePatterns PPM-type phosphatase domain signature. 126 134 IPR000222 GO:0043169
Vvi9g0332 372 CDD PP2Cc 78 361 IPR001932 -
Vvi9g0332 372 MobiDBLite consensus disorder prediction 26 47 - -
Vvi9g0332 372 ProSiteProfiles PPM-type phosphatase domain profile. 76 361 IPR001932 -
Vvi9g0332 372 Gene3D - 65 370 IPR036457 -
Vvi9g0332 372 PANTHER PROTEIN PHOSPHATASE 53 361 IPR015655 GO:0004722|GO:0006470
Vvi9g0332 372 Pfam Protein phosphatase 2C 112 345 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0332 Vvi-Chr9 3205112 3219645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0332 77 366 PP2C-type Phosphatase Gene Family AT4G26080 46.753 3.50e-85 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0332 K14497 - vvi:100261766 741.11