Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0305 ATGGATCACAACGAGATTGCAACAGGCCATGCCGACACTTCTGAGGATAAGAATTGCAAGGAGGAGGCTTCAACAATGAAAGCAAACTGTAGGACCCCTGATATTACAGGCTCTTGGCTACAATTACCAATTCCAAATGTTACCAAAAAAGTCTTTCAAGTCGCCTCACCTTTTTGGTGTCCTGTTAAAACAACTGTTATTAGTCAGAGCCACTACGGCAACTCATCATCTCCACTTTTCAGTTCTTCACTTGTTTTTCAACTCATCTTTTTTCTGTCATCCCCTCAAGCAATGGATTGTGTGAGCCCAATCTTGGACGTAGCCACCCGCTTGTGGGATTGCACCGCCAAGCGTGTAGTTTATATTCCTGAGCTTGAAAAAAATCTCAACTCTCTGAAGAGCTTAACGGAGGAACTGAGCAACTTAAGTAAGGATGTGATGGTAAGTGTTGAGCGTGAGGAGGAACTACAACAGAGTAGGCGTACGCATGAAGTGGATGGTTGGCTCCTCGCTGTGCAGGTCATGGAAGCTGAAGTGGAAGAAATATTGCAAAATGGGCATCAAGAAATCCAACAGAAATGTCTCGGAACCTGTCCTAAGAATTGCAGGTCAAGCTACAGGCTGGGGAAGATTGTGAGTAGAAAGATCGATGCTGTGACTGAATTAAAGGGCAAAGGGCATTTTGATTTTGTGGCTCATACATTGCCTTGTGCTCCTGTGGATGAGAGACCGATGGGGAAGACTGTGGGCTTAGACTTGATGTTCGAGAAGGTTCGAAGATGCCTGGAAGATGAGCAAGTAAGAAGTATTGGGTTGTATGGAATTGGGGGTGCTGGAAAAACGACCCTCTTGCGGAAAATCAATAATGAGTATTTTGGTAAAAGAAACGATTTTGATGTGGTGATATGGATAGTGGTGTCAAAACCAATCAACATAGGAAATATTCAAGACGTGATCCTGAATAAATTACCGACCCCAGAGCACAAATGGAAGAATCGTAGCAAGGAAGAGAAGGCTGCAGAAATATGCAAGTTGTTGAAAGCCAAAAACTTTGTGATATTGCTTGATGATATGTGGGAGCGACTCGATCTCTTCGAGGTGGGGATCCCTCATTTGGGTGACCAAACTAAGTCCAAAGTAGTACTCACTACGCGATCTGAACGAGTATGCGATGAAATGGAAGTTCATAAGAGGATGAGGGTAAAGTGTTTGACACCGGATGAAGCATTTTCTCTGTTCCGTGACAAGGTTGGTGAGAATATCTTGAATTCACATCCGGAAATAAAAAGGCTTGCAAAGATTGTCATTGAAGAATGTAAAGGACTGCCACTTGCCCTCATCGTCATTGGGCGATCAATGGCTAGCAGAAAAACTCCTCGAGAATGGGAGCAAGCAATTCAAGTGCTGAAGAGTTACCCAGCAGAGTTTTCAGGTATGGGAGATCAAGTATTTCCAATTTTGAAATTCAGTTATGATCACTTGGACAATGATACCATCAAATCATGTTTCCTATATTGTTCTACATTCCCTGAAGACCATGAAATTCTGAATGAAGGCCTCATAGATCTTTGGATTGGGGAGGGGTTTCTGAACAAATTTGATGATATACACAAAGCACATAATCAAGGAGATGAGATTATTAGAAGCTTAAAACTTGCGTGTCTCTTGGAAGGCGATGTATCTGAAGACACTTGTAAGATGCATGATGTGATCCGTGACATGGCTCTATGGTTATCATGTGATTATGGGAAAAAAAGACACAAAATTTTTGTACTAGATCATGTTCAGTTGATTGAAGCATATGAAATTGTGAAATGGAAAGAAGCTCAACGGATTTCACTATGGGATTCTAATATCAATAAAGGATTCTCTCTATCACCTTGTTTCCCCAATCTCCAAACTTTGATTTTGATAAATAGTAACATGAAGTCACTTCCAATTGGATTCTTCCAATCCATGCCTGCCATAAGAGTTTTGGATTTGTCACGTAATGAAGAATTAGTGGAGTTACCTTTGGAGATTTGCAGATTAGAGAGTTTGGAATATCTGAATCTAACATGGACCAGTATAAAAAGGATGCCTATAGAACTAAAGAATTTGACAAAACTGAGGTGTTTGATATTGGACCGTGTAAAGTGGCTTGAAGTAATTCCATCAAATGTGATATCTTGCCTTCCAAATTTGCAGATGTTTAAAATGGTGCACCGCATTTCCCTAGATATTGTGGAATATGATGAAGTTGGAGTGTTGCAGGAGTTGGAATGCTTGCAATACCTGAGTTGGATAAGTATTAGCTTACTTACAGCCCCAGTTGTTAAAAAATATCTCACCTCCTTGATACTGCAGAAGCGCATACGAGAACTAAACATGAGGACGTGCCCAGGTTTGAAGGTGGTGGAGCTGCCACTTTCGACTTTGCAAACACTCACTATGCTTGGATTTGATCATTGTAATGATTTGGAACGTGTTAAAATAAATATGGGACTGTCTCGAGGTCATATCTCAAACTCAAACTTCCACAACCTTGTTCGTGTGAATATTTCTGGGTGTCGATTCTTGGACCTGACCTGGCTTATTTATGCTTCAAGCCTTGAGTTCCTGTTGGTTCGCACTAGTCGTGACATGGAAGAAATTATAGGGAGTGATGAGTGTGGAGACTCAGAAATTGACCAACAAAATCTCAGCATATTCTCAAGACTTGTGGTGTTATGGTTGCATGATCTCCCAAATCTAAAGAGTATCTACAGGCGGGCCTTGCCATTTCATTCCCTAAAAAAGATCCATGTGTATCATTGTCCAAATCTAAGGAAATTGCCATTGAATTCCAATAGTGCCAGCAACACTCTAAAAATAATTGAGGGGGAATCAAGCTGGTGGGAGAACTTGCAGTGGGAGGATGACAACCTCAAGCGCACTTTCACTCCGTATTTCAAAACATGGTGA 2943 0.4128 MDHNEIATGHADTSEDKNCKEEASTMKANCRTPDITGSWLQLPIPNVTKKVFQVASPFWCPVKTTVISQSHYGNSSSPLFSSSLVFQLIFFLSSPQAMDCVSPILDVATRLWDCTAKRVVYIPELEKNLNSLKSLTEELSNLSKDVMVSVEREEELQQSRRTHEVDGWLLAVQVMEAEVEEILQNGHQEIQQKCLGTCPKNCRSSYRLGKIVSRKIDAVTELKGKGHFDFVAHTLPCAPVDERPMGKTVGLDLMFEKVRRCLEDEQVRSIGLYGIGGAGKTTLLRKINNEYFGKRNDFDVVIWIVVSKPINIGNIQDVILNKLPTPEHKWKNRSKEEKAAEICKLLKAKNFVILLDDMWERLDLFEVGIPHLGDQTKSKVVLTTRSERVCDEMEVHKRMRVKCLTPDEAFSLFRDKVGENILNSHPEIKRLAKIVIEECKGLPLALIVIGRSMASRKTPREWEQAIQVLKSYPAEFSGMGDQVFPILKFSYDHLDNDTIKSCFLYCSTFPEDHEILNEGLIDLWIGEGFLNKFDDIHKAHNQGDEIIRSLKLACLLEGDVSEDTCKMHDVIRDMALWLSCDYGKKRHKIFVLDHVQLIEAYEIVKWKEAQRISLWDSNINKGFSLSPCFPNLQTLILINSNMKSLPIGFFQSMPAIRVLDLSRNEELVELPLEICRLESLEYLNLTWTSIKRMPIELKNLTKLRCLILDRVKWLEVIPSNVISCLPNLQMFKMVHRISLDIVEYDEVGVLQELECLQYLSWISISLLTAPVVKKYLTSLILQKRIRELNMRTCPGLKVVELPLSTLQTLTMLGFDHCNDLERVKINMGLSRGHISNSNFHNLVRVNISGCRFLDLTWLIYASSLEFLLVRTSRDMEEIIGSDECGDSEIDQQNLSIFSRLVVLWLHDLPNLKSIYRRALPFHSLKKIHVYHCPNLRKLPLNSNSASNTLKIIEGESSWWENLQWEDDNLKRTFTPYFKTW* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0305 980 Gene3D Ribonuclease Inhibitor 778 967 IPR032675 -
Vvi9g0305 980 Gene3D - 403 490 IPR042197 -
Vvi9g0305 980 FunFam Probable disease resistance protein At1g61300 231 398 - -
Vvi9g0305 980 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 246 506 IPR027417 -
Vvi9g0305 980 Coils Coil 122 145 - -
Vvi9g0305 980 MobiDBLite consensus disorder prediction 1 20 - -
Vvi9g0305 980 Pfam NB-ARC domain 254 492 IPR002182 GO:0043531
Vvi9g0305 980 FunFam Probable disease resistance protein At5g66910 403 490 - -
Vvi9g0305 980 FunFam Probable disease resistance protein At1g63360 491 577 - -
Vvi9g0305 980 SMART AAA_5 266 408 IPR003593 GO:0016887
Vvi9g0305 980 Gene3D - 491 576 IPR036388 -
Vvi9g0305 980 PRINTS Disease resistance protein signature 439 453 - -
Vvi9g0305 980 PRINTS Disease resistance protein signature 269 284 - -
Vvi9g0305 980 PRINTS Disease resistance protein signature 345 359 - -
Vvi9g0305 980 PRINTS Disease resistance protein signature 651 667 - -
Vvi9g0305 980 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 130 951 - -
Vvi9g0305 980 SUPERFAMILY L domain-like 563 951 - -
Vvi9g0305 980 Gene3D - 243 400 IPR027417 -
Vvi9g0305 980 Gene3D Ribonuclease Inhibitor 602 777 IPR032675 -
Vvi9g0305 980 Pfam Leucine rich repeat 630 689 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0305 Vvi-Chr9 2984855 2987797 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0305 267 575 WRKY Transcription Factor Family AT5G45050 25.392 1.40e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0305 - K13459 vvi:100259933 1981.84