Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0293 ATGGGCATCCATTGTTGCTGGGCATTGTTTTTGGCCTTGGCATTGGCATTGACCTTTGCCACCATCGGCGAAGCTCAGGACGCAACTCTTGTTCCAGCCATCATAACTTTTGGAGACTCTGCTGTAGATGTTGGGAATAATGACTATCTCCTCACCATTTTCAAGGCCAATTACCCTCCTTATGGAAGGGACTTCATCAACCATCAGCCTACAGGGAGGTTCTGCAATGGAAAACTAGCCACAGACATTACTGCTGACACTCTTGGCTTCAAGACTTACCCCCCAGCATACCTTAGCCCCAAGGCATCAGGGAAGAACCTTCTGATTGGAGCCAACTTTGCCTCTGCTGGCTCTGGTTATGATGACAAAACAGCCATCTTAAGTCATGCAATTCCATTGTCTCAACAATTAGAGTACTACAAGGAGTACCAAGCTAAGCTAGCAAAGGTAGCAGGTAGTCAAAAAGCGGCCACCATTATCAAGGATGCACTATATGTAGTGGGAGCTGGTAGCAGCGATTTTATTCAGAATTACTATGTCAATCCTTTCCTTAACAAAGTATACACTCCTGATCAGTATGCCTCAATCCTCGTTGGCATATTTTCGAGCTTCATCAAGGACTTGTATGGCTTGGGGGCAAGGAGAATTGGGCTGACTTCACTCCCACCATTAGGCTGCCTGCCAGCAACAAAAACTTTATTCGGGTTCCATCAGAGCGGTTGTGTATCCAGGCTCAACACCGACGCCCAAGGCTTCAACAAGAAAATCAATTCAGCAGTCTCAAGTCTGCAGAAGCAACTTTCAGGCCTCAAAATTGCTGTGTTTGACATTTATAAGCCCCTCTATGATATCATCAAGTCTCCTTCAGACTACGGTTTTGCAGAAGCCAGGAAAGGTTGCTGCCAGACACGTAAAACAGGGACAGTTCCCATACTCTGTGACCCAAAGTCTCCAGGAACTTGCCGGAATGCCAGTCAATATGTGTTTTGGGACGATGTCCATCTGTCCCAGGCTACTAATCAGATGCTTGCCGAATCAATGCTTCTCCAGGGCATTTCCCTCATTTGA 1068 0.4654 MGIHCCWALFLALALALTFATIGEAQDATLVPAIITFGDSAVDVGNNDYLLTIFKANYPPYGRDFINHQPTGRFCNGKLATDITADTLGFKTYPPAYLSPKASGKNLLIGANFASAGSGYDDKTAILSHAIPLSQQLEYYKEYQAKLAKVAGSQKAATIIKDALYVVGAGSSDFIQNYYVNPFLNKVYTPDQYASILVGIFSSFIKDLYGLGARRIGLTSLPPLGCLPATKTLFGFHQSGCVSRLNTDAQGFNKKINSAVSSLQKQLSGLKIAVFDIYKPLYDIIKSPSDYGFAEARKGCCQTRKTGTVPILCDPKSPGTCRNASQYVFWDDVHLSQATNQMLAESMLLQGISLI* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0293 355 FunFam GDSL esterase/lipase APG 23 352 - -
Vvi9g0293 355 Pfam GDSL-like Lipase/Acylhydrolase 34 346 IPR001087 GO:0016788
Vvi9g0293 355 PANTHER GDSL ESTERASE/LIPASE EXL3 14 346 - -
Vvi9g0293 355 CDD SGNH_plant_lipase_like 32 348 IPR035669 -
Vvi9g0293 355 SUPERFAMILY SGNH hydrolase 153 347 - -
Vvi9g0293 355 Gene3D SGNH hydrolase 21 351 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0293 Vvi-Chr9 2894709 2902293 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0293 6 348 Pollen Coat Proteome AT1G75910 34.104 5.92e-61 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0293 - - vvi:104877427 649.047