Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0285 ATGAACAGTAGACCACCACTGGTTCGGCTCATCTTTGTCCTGTTCACCATCATTTCCTCAGGCAACAACCCAGAATTGGTTGCCGGAAAACCCCATCACACTGCCTCAACCTTCCAGCACAACCATCCTTCTCCCCGGAGACTTGCTGCTGACACCCAAGGGTTCATAAGCATCGACTGTGGGATAGCTCCAGGCTCATATTATACTGATGATAAAACCCAGATACCTTACACTTCTGATGCAGATTTCACAGACACTGGAATCAATTATAATGTTTCCAGGTCTGAAAATCCTTCAAAGCAGCTCATGAATGTTAGAAGCTTCCCAGAAGGAGCCAGGAATTGTTACACCCTAGAACCAGAAAAAGGCAAGGGTAATAAGTATTTGATCAGAGCTTTCTTCATGTATGGGAACTATGACTCCAAGAATCAACTCCCAGTCTTCAAACTTCATCTGGGTGTTGATGAATGGGACACTATCAACTTCAACAATTCAAGCCAAACTGTAAGGAAGGAAATCATACATGTCCCCAAAACAGATTACATAGATGTGTGTCTCGTCAACAATGGTTCTGGGACACCCTTCATATCTGCATTAGAGCTTAGACCGCTTGGTAATTCCAGTTATAATAAAACAGAATCGGGTTCTCTGCTACTCTTTAACAGATGGGACATTGGTTCAGAGCAAGAAAAATTGCAAGTCAGGTACAAAGATGATGCTCTTGACCGCATTTGGAACTCCTACATGAGTACTTCTTGGGAATCCATAACTGCAGGATTTGAAAGCTATTCCTACAGCGAAACTCGGTTTAAACTTCCGGGAATAATCATGTCTACTGCTGCAACACCTAAAAATGAAAGTGAACCCTTGAGATTCTTCTTGGATATGGATGATCCTTCTCAAAGGTTTTATTTGTACATGCATTTTTCTGAGGTTTTGCAACTCCAGGGCAACCAGTCCAGAGTATTTACCATCTGGCTGAATGGCAACTTATGGAGCGATGCTGTGGCTCCGGAACGCCTTACCTCGACCACAATATTTAGCACAAATTCTGTAAGGGGAAGTAGATTGTCATTTTCGCTTCAGAAGACGGGTGAATCCATGCTTCCCCCCATTATCAATGCCTTGGAAGTTTATGTGATAAAGGAATTCTCACAATCAACAACTGACCAAGAAGATGGTATGTTATTATCAGTTCAATTGTGGGTGACAGTTATAAAGCCTCCTAAATATTTCTCCTTCTTTGAAATTGTAGTTGAAGCTATCAAGAAGATTAAATCAGTGTACATGGTGAGGAGAAACTGGCAAGGAGATCCATGTCTTCCAATGGATTACCAATGGGATGGCCTGAAATGCAGCGATAACGGTTCCCCCACCTTAATATCATTGAACCTCTCATATAGCAATTTGACAGGAAAGATACATCCTTCATTTTCCAATCTCAAATCATTACAAAATCTGGATTTGTCTTACAATAACTTGACTGGATCAGTGCCAGAGTTCTTAGCTGAACTGTCATCTCTAACATTCCTTAATTTAGAAGGGAACAACTTGACAGGTTCAGTTCCCCAGGCTCTTATGGAGAAGTATCAGAATGGCACATTGTCCTTGAGTCTTCGAGAAAATCCAAATCTTTGTCTGTCAGTCTCATGCAAAGGAAAGCAGAACAAGAACTTCATTGTTCCAGTTCTTGCATCCATTATATCAGTTCTGGTCCTGTTCCTTCTAATTGCTGTTGGTATCATTTGGAACTTCAAAAGGAAAGAAGACACAGCTATGGAGATGGTCACCAAAGAAGGATCTTTGAAGTCAGGGAACTCAGAGTTCACTTACTCTGAGCTTGTGGCTATTACCAGAAACTTCACTTCCACCATTGGACAAGGAGGATTTGGAAATGTTCATCTAGGCACTCTGGTAGATGGCACTCAAGTCGCGGTCAAGCTGCGCTCACAATCATCAATGCAAGGCTCCAAGGAATTTCGAGCTGAGGCGAAACTCTTGATGAGAGTTCATCATAAAAACTTGGTTCGCCTTGTTGGGTATTGCAATGATGGTACAAATATGGCCCTCATTTATGAATATATGTCTAATGGAAACTTGAGACAGAGGTTATCAGAGAGAGATACAGATGTCTTGCATTGGAAAGAGAGGCTTCAAATTGCAGTTGATGCAGCACAAGGACTGGAGTATCTGCACAATGGTTGCAAGCCACCAATAATCCACAGAGATTTGAAGACTTCCAACATATTATTAAATGAAAAACTGCAAGCTAAGATAGCTGATTTTGGGCTGTCCAGAGACCTTGCAACTGAAAGTGGCCCTCCTGTATCGACTGTCCCTGCAGGCACCCCAGGATACCTGGATCCTGAGTATTACTCATCTGGAAATTTGAATAAAAGGAGCGATGTTTATAGCTTTGGGATTGTCTTGTTGGAGCTGATTACCGGCCAGCCTGCAATAATAACCCCTGGGAACATTCACATAGTTCAATGGATTAGTCCTATGATTGAAAGAGGGGATATTCAAAACGTTGTTGATCCAAGGTTGCAAGGAGATTTCAACACCAATTCTGCCTGGAAAGCTCTGGAGACAGCCTTAGCATGTGTACCATCAACTGCAATCCAAAGGCCAGACATGAGCCATGTACTGGCAGACTTAAAGGATTGTTTGGAGATAGAGGTGGGTGCCATGAGAACTCAGAGGATAGATAGCTACAAAATGGGATCAAGCAACACCCTAAAAAGCTGTGCAGTGGATCTTGAAAATGAAATGGCTCCCCATGTTAGATAG 2790 0.4229 MNSRPPLVRLIFVLFTIISSGNNPELVAGKPHHTASTFQHNHPSPRRLAADTQGFISIDCGIAPGSYYTDDKTQIPYTSDADFTDTGINYNVSRSENPSKQLMNVRSFPEGARNCYTLEPEKGKGNKYLIRAFFMYGNYDSKNQLPVFKLHLGVDEWDTINFNNSSQTVRKEIIHVPKTDYIDVCLVNNGSGTPFISALELRPLGNSSYNKTESGSLLLFNRWDIGSEQEKLQVRYKDDALDRIWNSYMSTSWESITAGFESYSYSETRFKLPGIIMSTAATPKNESEPLRFFLDMDDPSQRFYLYMHFSEVLQLQGNQSRVFTIWLNGNLWSDAVAPERLTSTTIFSTNSVRGSRLSFSLQKTGESMLPPIINALEVYVIKEFSQSTTDQEDGMLLSVQLWVTVIKPPKYFSFFEIVVEAIKKIKSVYMVRRNWQGDPCLPMDYQWDGLKCSDNGSPTLISLNLSYSNLTGKIHPSFSNLKSLQNLDLSYNNLTGSVPEFLAELSSLTFLNLEGNNLTGSVPQALMEKYQNGTLSLSLRENPNLCLSVSCKGKQNKNFIVPVLASIISVLVLFLLIAVGIIWNFKRKEDTAMEMVTKEGSLKSGNSEFTYSELVAITRNFTSTIGQGGFGNVHLGTLVDGTQVAVKLRSQSSMQGSKEFRAEAKLLMRVHHKNLVRLVGYCNDGTNMALIYEYMSNGNLRQRLSERDTDVLHWKERLQIAVDAAQGLEYLHNGCKPPIIHRDLKTSNILLNEKLQAKIADFGLSRDLATESGPPVSTVPAGTPGYLDPEYYSSGNLNKRSDVYSFGIVLLELITGQPAIITPGNIHIVQWISPMIERGDIQNVVDPRLQGDFNTNSAWKALETALACVPSTAIQRPDMSHVLADLKDCLEIEVGAMRTQRIDSYKMGSSNTLKSCAVDLENEMAPHVR* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0285 929 PANTHER OS07G0107800 PROTEIN-RELATED 56 890 - -
Vvi9g0285 929 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 695 898 - -
Vvi9g0285 929 Pfam Leucine rich repeat 458 518 IPR001611 GO:0005515
Vvi9g0285 929 CDD STKc_IRAK 625 887 - -
Vvi9g0285 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 739 751 IPR008271 GO:0004672|GO:0006468
Vvi9g0285 929 Gene3D Ribonuclease Inhibitor 417 539 IPR032675 -
Vvi9g0285 929 SMART serkin_6 619 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g0285 929 FunFam Leucine-rich repeat receptor-like kinase 415 548 - -
Vvi9g0285 929 Pfam Protein tyrosine and serine/threonine kinase 621 885 IPR001245 GO:0004672|GO:0006468
Vvi9g0285 929 Gene3D Transferase(Phosphotransferase) domain 1 695 908 - -
Vvi9g0285 929 ProSiteProfiles Leucine-rich repeat profile. 483 505 IPR001611 GO:0005515
Vvi9g0285 929 Pfam Malectin-like domain 58 380 IPR024788 -
Vvi9g0285 929 ProSiteProfiles Protein kinase domain profile. 619 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g0285 929 SUPERFAMILY L domain-like 416 572 - -
Vvi9g0285 929 SUPERFAMILY Protein kinase-like (PK-like) 605 886 IPR011009 -
Vvi9g0285 929 Gene3D Phosphorylase Kinase; domain 1 601 694 - -
Vvi9g0285 929 FunFam Leucine-rich repeat receptor-like protein kinase 596 694 - -
Vvi9g0285 929 ProSitePatterns Protein kinases ATP-binding region signature. 625 647 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0285 Vvi-Chr9 2778212 2782247 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0285 49 890 Receptor kinase-like Gene Family AT2G19210 47.196 0.0 777
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vvi9g0285 Malectin_like 3.3e-110 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0285 - - vvi:100251452 1800.41