Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0284 ATGCATAAAATACAAGTAATCAACCCAAGACATACGCTGCAAGTCAATACCCTTTCCCAACAAACACGTTGGAAGTCAACATCATTCCTACTTCCTCCAAGCTTGGGAGGCTTAGTATACAAGGCTTTGCCTATAAAGCTCGTTTCCGCTCCACGTTATCCGCTACATGTTATCCATATCTCTTCTTCTTTCCTTAATCTTCACCACTTCAGGTTCATAAGCATCGATTGTGGGATAGCTCCGGGCTCCTATTATACAGATAGTGAAACCGAGATATATTACACTTCGGATGCAGGATTCACAGATACTGGAATCAATTATAACGTTTCCGAAGAATATGTTTATCAAAATAACGATCAACATCTCAAGAACGTTAGAAGCTTCCCAGAAGGAGACAGGAACTGTTACACCTTATGGCCAGGACAAGGCAAGAATCATAAGTATTTGATCAGGGCTCGGTTCTTGTATGGGAATTATGATTCCAAGAATCAACTTCCAATCTTCAAACTATATCTAGGTGTTGACGAATGGACCACAGTGAATATAAGAAATGTCACTTCTACTTACAGGAAGGAAATCATACACATACCAATTACAGATTACATAGATGTGTGTCTGGTAAACATCGGTTCGGGGACACCATTCATATCAGTGTTAGAGCTCAAACGGCTTAATGATTCGATTTATAGTCCAGCTGAACCAGGGTCACTGATTCTCTATGACAGGTGGGATTTTGGTACACAACAAGAGGAGTGGAAGGAAAAAGATGATGTTTACGATCGGATTTGGAAACCAAATACATGGTGGTCTTGGTTGTCCATTAATTCATCAGTTGTAAGTTCTTCCTTTAGTACCTCTGACTATAAACTACCGGGTATTGTCATGGCGACTGCTGCAAAACCTGCAAATGAAAGTGAATCCTGGGGTATCTCTTTAAGCATAGATGATGATCCTTCTCAAAAGTTGTACATGTACATGCACTTTGCGGAGGTTGAGGATCACAAAGGCCAAATCAGAGAATTTACTGTCTCCGTGAATGATGAACCATTTAGTGGGCCTGTGGCTCCTAGACTCCTTTTTTCGGACACCGTGTCTAGCAAATATTCCATTAGTGGAAGTACCACAAAGAAATTGTCCTTTTCACTAGAAAGGACAAACAGATCCACGCTTCCGCCAATTATTAATGCTATGGAGGCTTACATGATAAAAGAATTCCCACAATCATCAACTCAACAAAACGATGTTGATGCAATCAAGAGGATCAAATCAGATTACGCAGTGGGCAGGAACTGGCAAGGAGACCCATGTCTCCCCATGGAATACCAATGGGATGGCCTCACTTGCAGCCATAATACTTCCCCTACTGTAATCTCATTCATGAATATCTTCTCTATAATCTTTGCTCAAAATGCATGCAACTCAAATTATTTCATGGATTTATCATACAACAACTTGACTGGACCAGTACCAGAATTTTTTGCCGACTGGCCATCTTTAAAAACTCTGAATTTAACGGGGAACAACCTAACAGGTTCGGTTCCACAGGCTGTTACGGATAAGTTCAAGGATGGAACTCTGAGTCTCGGAGAAAATCCAAATCTTTGTCCGACCGTCTCAGGAGAGAAACCAAAGGTATTTTCTTTCTTTCAGTTTCATTTTTTTCTAAGTGAGGATTTAACATTTTATTACTCCAATATTTTTGTTGTGATTTCCTTAGCTACAACCATAGAGACAGTCACTGAACGCCCCAAAGAAGGGCCATTGAAGTCAGGGAATTGTGAGTTCACTTACTCTGAGGTGGTGGGTATCACCAATAACTTTAATCGCCCCATTGGTAGAGGAGGATTTGGAGAAGTTTATTTAGGCACTTTGGCAGATGACACACAGGTTGCCGTCAAGGTGCATTCTCCATCATCAAATCAAGGCCCTAAGGCATTTCGAGCGGAGGCGAAACTCTTGACAAGAGTTCATCATAAAAACTTGGTTCGTCTAATTGGGTACTGCGATGACAGTACAAACATGGTTCTCATTTATGAATACATGTCCAATGGAAACCTGCAACAGAAGTTATCAGCGAGAGAAGCTGCAGATGTTTTGAACTGGAAACAGAGACTTCAAATTGCAGTAGATGCAGCACATGGATTGGAGTATCTACACAATGGCTGTAAGCCACCAATAGTCCACAGAGACATGAAATCTTCCAACATTCTATTAACTGAATCACTGCAAGCCAAGATAGCTGATTTTGGAATGTCCAGAGATCTTCAAAGCTTATCAACTGACCCAGTAGGCACACCTGGATATTTTGATCCTGAATGCCAGTCCACAGGAAATTTGAATGAGAAGAGTGATGTTTATAGCTTTGGGATTGTTTTATTGGAGCTAATCACCGGCCGGCGTGCAATAATCCCTGGGGGCATTCATATAGCTGGATGGGTTAGTCCTATGATTGAAAGAGGGGATATTCGAAGCATTGTTGATCCAAGGTTACAAGGAGATTTCAACACCAATTCTGCCTGGAAAGCAGTAGAGATAGCCTTAGCATGTGTAGCATCAACAGGAATGCAAAGGCCAGACATGAGTCATGTAGTGGTAGACTTGAAGGAATGTTTGGAGAGGGAGGTGGCTTCCAGGAGAATTCAGAGGGTAGGTGGCCACAGCATCGGATCAGGCAATTTCCTAGAAAATGTTCCCTTGGTTCTTAGCACTGAAGTGGCTCCCCATGCTAGGTAG 2733 0.4182 MHKIQVINPRHTLQVNTLSQQTRWKSTSFLLPPSLGGLVYKALPIKLVSAPRYPLHVIHISSSFLNLHHFRFISIDCGIAPGSYYTDSETEIYYTSDAGFTDTGINYNVSEEYVYQNNDQHLKNVRSFPEGDRNCYTLWPGQGKNHKYLIRARFLYGNYDSKNQLPIFKLYLGVDEWTTVNIRNVTSTYRKEIIHIPITDYIDVCLVNIGSGTPFISVLELKRLNDSIYSPAEPGSLILYDRWDFGTQQEEWKEKDDVYDRIWKPNTWWSWLSINSSVVSSSFSTSDYKLPGIVMATAAKPANESESWGISLSIDDDPSQKLYMYMHFAEVEDHKGQIREFTVSVNDEPFSGPVAPRLLFSDTVSSKYSISGSTTKKLSFSLERTNRSTLPPIINAMEAYMIKEFPQSSTQQNDVDAIKRIKSDYAVGRNWQGDPCLPMEYQWDGLTCSHNTSPTVISFMNIFSIIFAQNACNSNYFMDLSYNNLTGPVPEFFADWPSLKTLNLTGNNLTGSVPQAVTDKFKDGTLSLGENPNLCPTVSGEKPKVFSFFQFHFFLSEDLTFYYSNIFVVISLATTIETVTERPKEGPLKSGNCEFTYSEVVGITNNFNRPIGRGGFGEVYLGTLADDTQVAVKVHSPSSNQGPKAFRAEAKLLTRVHHKNLVRLIGYCDDSTNMVLIYEYMSNGNLQQKLSAREAADVLNWKQRLQIAVDAAHGLEYLHNGCKPPIVHRDMKSSNILLTESLQAKIADFGMSRDLQSLSTDPVGTPGYFDPECQSTGNLNEKSDVYSFGIVLLELITGRRAIIPGGIHIAGWVSPMIERGDIRSIVDPRLQGDFNTNSAWKAVEIALACVASTGMQRPDMSHVVVDLKECLEREVASRRIQRVGGHSIGSGNFLENVPLVLSTEVAPHAR* 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0284 910 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 681 881 - -
Vvi9g0284 910 Pfam Malectin-like domain 75 401 IPR024788 -
Vvi9g0284 910 CDD STKc_IRAK 611 869 - -
Vvi9g0284 910 Pfam Protein tyrosine and serine/threonine kinase 607 866 IPR001245 GO:0004672|GO:0006468
Vvi9g0284 910 Gene3D Transferase(Phosphotransferase) domain 1 681 884 - -
Vvi9g0284 910 Gene3D Ribonuclease Inhibitor 415 527 IPR032675 -
Vvi9g0284 910 SUPERFAMILY Protein kinase-like (PK-like) 590 867 IPR011009 -
Vvi9g0284 910 PANTHER OS07G0107800 PROTEIN-RELATED 73 871 - -
Vvi9g0284 910 SUPERFAMILY L domain-like 477 535 - -
Vvi9g0284 910 ProSitePatterns Serine/Threonine protein kinases active-site signature. 726 738 IPR008271 GO:0004672|GO:0006468
Vvi9g0284 910 ProSitePatterns Protein kinases ATP-binding region signature. 611 633 IPR017441 GO:0005524
Vvi9g0284 910 Gene3D Phosphorylase Kinase; domain 1 580 680 - -
Vvi9g0284 910 FunFam receptor-like protein kinase FERONIA 573 680 - -
Vvi9g0284 910 ProSiteProfiles Protein kinase domain profile. 605 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g0284 910 SMART serkin_6 605 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0284 Vvi-Chr9 2728009 2740198 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0284 72 876 Receptor kinase-like Gene Family AT4G29180 46.226 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vvi9g0284 Malectin_like 2.7e-103 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0284 - - vvi:100261686 1546.95