Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0283 ATGGAACAAAAAGGAATAGAAGAAGGACGGTGGGACTTTTTCTTGGGGAGAGAGACCTTTTCTTTGAGGGGAAATCAACACACGCAAGAGTTTTTTGAAGGGAGCGGTAGAGGACTTGAAGGACTAATTGGGCTGCCATTTCGACACATCAAGAGAGTATTTTTTCGATACAATACAATTGGTATTTACTTGCTATGTTCCTCCGTCTTAACCAATTTTCCAATGGCGATAATCCCCATATTTCAACCACATGCCTTGCTGGAGTGGAAGTTAATCAGGGAAAAAGATGATGTTTACGATCGGATTTGGAAACCATTAACACGGTCATCTTGGTTGTCCATTAATTCATCACTTGTAAGTTCTTCCTTTAGTACCTCTGACTATAAACTACCGGGTATTGTCATGGCGACTGCTGCAACACCTGCAAATGAAAGTGAATCCTGGCGTATCTCTTTAGGCATAGATGATGATCCTTCTCAAAAGTTGTACATGTACATGCACTTTGCGGAGGTTGAGGATCTCAAAGGCCAAATCAGAGAATTTACCATCTCCGTGAACGATGATGAGTCATATGCTGGACCTCTGACTCCTGGATACCTTTTTTCAGTCACGGTATATAGCAAATATTCCGTGAGTGGAAGTACCACAAACAAATTGTCCTTTTCACTAGAAAGGACAAACAGATCCACGCTTCCACCAATTATCAATGCTATGGAGGTTTACATGATAAAAGAATTCGCACAATCATCAACTCAACAAAACGATGTTGATGCAATCAAGACGGTCAAATCAGGATATGCAGTGAGCAGGAACTGGCAAGGAGACCCATGTCTCCCAATGGAATACCAATGGGATGGCCTGACTTGCAGCCACAATACTTCCCCTGCTATAATCTCATTGAACCTCTCATCCAGCAATTTGTCCGGGAACATACTTACTTCATTTTTGAGTCTCAAATCATTACAAAATCTGGATTTATCATACAACAACTTGACTGGACCTGTACCAGATTTTTTTGCAGACTTTCCATCTTTAAAAACTCTGAATTTAACGGGGAACAACCTAACAGGTTCGGTTCCACAGGCTGTTACGGATAAGTTCAAGGATGGAACTCTGAGTGGACGTACCATGTTCTATTTTATGCAAGTTTTGGAGAAAATCCAAATCTTTGTCCGAGAGAAACCAAAGGTATTTTCTTTCTTTCACTTTCATTTTTTTCTAAGTGAGGATTCAACATTTTATTACTCCATTTTTGTTGTGATTTCCTTAGCTACAACCATAGAGACGGTCACTGAACGCCCCAAAGAAGGGCCATTGAAGTCAGGGAATTGTGAGTTCACTTACTCTGAGGTTGTGGGTATCACCAATAACTTTAATCGCCCCATTGGTAGAGGAGGATTTGGAGAAGTTTATCTAGGCACTTTGGCAGATGACACTCAGGTTGCCGTCAAGGTTCATTCTCCATCATCGAATCAAGGCCCTAAGGCATTTCGAGCGGAGGCGAAACTCTTGACGAGAGTTCATCATAAAAACTTGGTTCGTCTAATTGGGTACTGCGATGACAGTACAAACATGGTTCTCATTTATGAATACATGTCCAATGGAAACCTGCAACAGAAGTTATCAGCGAGAGAAGCTGCAGATGTTTTGAACTGGAAACAGAGACTTCAAATTGCAGTAGATGCAGCACATGGATTGGAGTATCTACACAATGGCTGTAAGCCACCAATAGTCCACAGAGACATGAAATCTTCCAACATTCTATTAACTGAATCACTGCAAGCCAAGATAGCGGATTTTGGAATGTCCAGAGATCTTCAAAGCTTATCAACCGACCCAGTAGGCACACCTGGATATTTTGATCCTGAATGCCAGTCCACAGGAAATTTGAATGAGAAGAGCGATGTTTATAGCTTTGGGATTGTTTTATTGGAGCTAATCACCGGCCGGCGTGCAATAATCCCTGGGGGCATTCATATAGCTGGATGGGTTAGTCCTATGATTGAAAGAGGGGATATTCGAAGCATTGTTGATCCAAGGTTACAAGGAGATTTCAACACCAATTCTGCCTGGAAAGCAGTAGAGATAGCCTTAGCATGTGTAGCATCAACAGGAATGCAAAGGCCAGACATGAGTCATGTAGTGGTAGACTTGAAGGAATGTTTGGAGACGGAGATGGCTTCCAGGAGAATTCAGAGGGTAGGTGGCCACAGCATCGGATCAGGCAATTTCCTAGAAAATGTTCCCTTGGTTCTTAGCACTGAAGTGGCTCCCCATGCTAGGTAG 2286 0.423 MEQKGIEEGRWDFFLGRETFSLRGNQHTQEFFEGSGRGLEGLIGLPFRHIKRVFFRYNTIGIYLLCSSVLTNFPMAIIPIFQPHALLEWKLIREKDDVYDRIWKPLTRSSWLSINSSLVSSSFSTSDYKLPGIVMATAATPANESESWRISLGIDDDPSQKLYMYMHFAEVEDLKGQIREFTISVNDDESYAGPLTPGYLFSVTVYSKYSVSGSTTNKLSFSLERTNRSTLPPIINAMEVYMIKEFAQSSTQQNDVDAIKTVKSGYAVSRNWQGDPCLPMEYQWDGLTCSHNTSPAIISLNLSSSNLSGNILTSFLSLKSLQNLDLSYNNLTGPVPDFFADFPSLKTLNLTGNNLTGSVPQAVTDKFKDGTLSGRTMFYFMQVLEKIQIFVREKPKVFSFFHFHFFLSEDSTFYYSIFVVISLATTIETVTERPKEGPLKSGNCEFTYSEVVGITNNFNRPIGRGGFGEVYLGTLADDTQVAVKVHSPSSNQGPKAFRAEAKLLTRVHHKNLVRLIGYCDDSTNMVLIYEYMSNGNLQQKLSAREAADVLNWKQRLQIAVDAAHGLEYLHNGCKPPIVHRDMKSSNILLTESLQAKIADFGMSRDLQSLSTDPVGTPGYFDPECQSTGNLNEKSDVYSFGIVLLELITGRRAIIPGGIHIAGWVSPMIERGDIRSIVDPRLQGDFNTNSAWKAVEIALACVASTGMQRPDMSHVVVDLKECLETEMASRRIQRVGGHSIGSGNFLENVPLVLSTEVAPHAR* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0283 761 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 532 731 - -
Vvi9g0283 761 Gene3D Phosphorylase Kinase; domain 1 431 531 - -
Vvi9g0283 761 FunFam receptor-like protein kinase FERONIA 424 531 - -
Vvi9g0283 761 Pfam Malectin-like domain 91 242 IPR024788 -
Vvi9g0283 761 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Vvi9g0283 761 Pfam Protein tyrosine and serine/threonine kinase 458 717 IPR001245 GO:0004672|GO:0006468
Vvi9g0283 761 Gene3D Ribonuclease Inhibitor 256 370 IPR032675 -
Vvi9g0283 761 ProSitePatterns Protein kinases ATP-binding region signature. 462 484 IPR017441 GO:0005524
Vvi9g0283 761 PANTHER OS07G0107800 PROTEIN-RELATED 92 722 - -
Vvi9g0283 761 CDD STKc_IRAK 462 720 - -
Vvi9g0283 761 SUPERFAMILY L domain-like 280 363 - -
Vvi9g0283 761 SMART serkin_6 456 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g0283 761 FunFam Leucine-rich repeat receptor-like kinase 254 373 - -
Vvi9g0283 761 ProSiteProfiles Protein kinase domain profile. 456 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g0283 761 Gene3D Transferase(Phosphotransferase) domain 1 532 736 - -
Vvi9g0283 761 SUPERFAMILY Protein kinase-like (PK-like) 440 718 IPR011009 -
Vvi9g0283 761 Pfam Leucine rich repeat 299 355 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0283 Vvi-Chr9 2713261 2725531 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0283 92 761 Receptor kinase-like Gene Family AT1G51850 43.575 4.99e-179 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vvi9g0283 PK_Tyr_Ser-Thr 4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0283 - - vvi:100266874 1190.25