Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0273 ATGGCCTCATGCAACAACAAGAAGAGTGTCGTTATACCTGTAATTGCATCTATTGCTGTAGTTTTAGTGCTTCTGATCGCATTCCTCATCTTGTGGGGCTTAAAAAGAAGACGACAACAACGGCAAGGTATTGATATCTATTTAAGAAATGATTTTGGAATGATCATAAAAAAATGCTTGTTTAGTTATATAACAATTGTTTCATCTCTGTGCATAGCCCTTGAATCCAAAGCCAATTATGAAGAAGATGGAAGATTGGAGTCAAAGAATCTGCAATTTACATATTCTGAACTTGTAAACATAACCAACAACTTCCAAAAAGTACTTGGGAAAGGAGGATTTGGATCAGTTTATGGTGGCTACTTCAATGATGGCACTCAAGTTGCTGTGAAGATGCTATCAGAACAATCAGCTCAAGGGTTTAAGGAGTTCCGCTCAGAGGCAAGCGCATATCTTCATCATCTATGA 468 0.3761 MASCNNKKSVVIPVIASIAVVLVLLIAFLILWGLKRRRQQRQGIDIYLRNDFGMIIKKCLFSYITIVSSLCIALESKANYEEDGRLESKNLQFTYSELVNITNNFQKVLGKGGFGSVYGGYFNDGTQVAVKMLSEQSAQGFKEFRSEASAYLHHL* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0273 155 SUPERFAMILY Protein kinase-like (PK-like) 83 150 IPR011009 -
Vvi9g0273 155 PANTHER OS07G0107800 PROTEIN-RELATED 6 150 - -
Vvi9g0273 155 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Vvi9g0273 155 Gene3D Phosphorylase Kinase; domain 1 84 154 - -
Vvi9g0273 155 ProSiteProfiles Protein kinase domain profile. 103 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g0273 155 Pfam Protein tyrosine and serine/threonine kinase 105 150 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0273 Vvi-Chr9 2654722 2655189 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0273 5 154 Receptor kinase-like Gene Family AT1G51850 36.842 4.58e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vvi9g0273 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0273 - - nnu:104588225 94.3597