Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0263 ATGGTGCTCATTTATGAGTACATGAACAAGGGGAACTTAAAAAAAAATTTAGCAGATAAGGAGGAAGCTGTCTTGAGTTGGAAACAAAGAGTTGGAATAGCACTTGATGCAGCAGAAGGACTGGAGTATTTACATAATGGTTGCAAGCCACCTATAATCCACAGAGACATTAAAACTGACAACATACTACTAAATGAAAAATTAGAAGCCAAAGTTGCAGATTTTGGGTGGTCTAGAAGTATGCCCGTTGAAGGCCAAACTCATGTATCAACTAGGATTGTTGGCACAGAAGGCTACTTTGACCCTGAGTAA 312 0.391 MVLIYEYMNKGNLKKNLADKEEAVLSWKQRVGIALDAAEGLEYLHNGCKPPIIHRDIKTDNILLNEKLEAKVADFGWSRSMPVEGQTHVSTRIVGTEGYFDPE* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0263 103 Pfam Protein kinase domain 1 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g0263 103 PANTHER OS07G0107800 PROTEIN-RELATED 1 103 - -
Vvi9g0263 103 SUPERFAMILY Protein kinase-like (PK-like) 2 103 IPR011009 -
Vvi9g0263 103 ProSiteProfiles Protein kinase domain profile. 1 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g0263 103 FunFam Os07g0541700 protein 8 96 - -
Vvi9g0263 103 ProSitePatterns Serine/Threonine protein kinases active-site signature. 52 64 IPR008271 GO:0004672|GO:0006468
Vvi9g0263 103 Gene3D Transferase(Phosphotransferase) domain 1 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0263 Vvi-Chr9 2574185 2575415 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0263 1 102 Receptor kinase-like Gene Family AT1G05700 64.706 1.08e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vvi9g0263 Pkinase 3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0263 - - vvi:100246405 213.772