Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0207 ATGGCTGATATCTTAGAAGAAATCAAGAATGAGACAGTTGATCTTGAGCGGATACCAGTTGAGGAGGTATTCGAACAGCTGAAATGTACAAGAGACGGTTTGACAACAGAGGAAGGGGAGAAGAGGCTCCAGATCTTTGGCCCAAACAAGCTGGAGGAGAAAGAGGCAAATTCTCTATGTTCTAGAGCAGAGAGCAAGTTGCTTAAGTTCTTGGGCTTTATGTGGAATCCCCTGTCATGGGTGATGGAAGCTGCTGCTATCATGGCCATTGTTCTGGCAAATGGAGGGGGAGAGGATCCAGATTGGCAAGATTTTGTTGGAATTGTAGTGTTGCTTTTCATCAACTCCACCATAAGTTTTATAGAAGAGAACAATGCAGGGAATGCTGCTGCAGCACTGATGGCTGGTCTTGCTCCCAAAGCCAAGGTTCTGAGAGATGGCAGATGGAGTGAGCAGGAGGCTGAAATCCTGGTCCCTGGGGATGTGATCAGCATCAAGTTGGGAGATATCATCCCAGCCGATGCCCGTCTCCTGGAGGGCGACCCTCTTAAAATTGATCAGGCTGCACTCACTGGTGAGTCCTTGCCTGTGACAAGGAACCCCGGTGATGAAGTCTTCTCTGGCTCCACCTGCAAGCAAGGTGAAATTGAGGCTGTTGTAATTGCCACTGGGGTGCACACCTTCTTTGGTAAGGCTGCTCACCTTGTTGACAACACCAACCACCAGGGCCACTTCCAAAAGGTGTTGACTGCCATTGGGAACTTCTGTATATGCTCCATTGCGCTTGGCATAATAGTAGAAATAGTGGTGATGTACCCAATTCAGAGACGCAAGTACAGGGATGGGATCAATAATCTTTTGGTGCTTCTCATTGGAGGAATACCAATTGCCATGCCAACAGTGTTGTCAGTGACAATGGCCATAGGTTCTCACCGTCTGTCAAAGCAAGGTGCTATCACAAAGAGGATGACAGCAATAGAAGAGATGGCTGGAATGGATGTTCTTTGCAGTGACAAGACTGGGACTCTCACCCTCAACAAGCTTACAGTGGACAAAAGCATGATTGAGATATTTTCAAAGGATGTGGACAGTGACATGGTGATTCTGCTTGCGGCTAGGGCTTCCCGGGTTGAGAATCAGGATGCCATTGATGCCTGCATTGTGGGAATGTTGGCTGACCCCAGTGAGGCAAGATCAGGGATAACAGAAGTACACTTTCTGCCATTTAACCCAGTGGAGAAGCGTACAGCCATAACATACATTGACTCTGATGGAAACTGGCATCGGGCTAGCAAAGGCGCGCCAGAACAGATCATTGAGCTCTGCAACCTCAAGGATCATGCAAAGAAGAAAGCTCATGCCATCATTGACAAGTTTGCTGACCGTGGTCTTCGCTCTCTTGCAGTTTCTCAACAAACAGTACCAGAGAAGAACAAGGAAAGCGCAGGAGGACCATGGCAATTTGTTGGTCTTTTGCCTCTATTTGACCCTCCAAGGCATGATAGTGCAGAGACCATTCGCCGTGCCCTTAACCTCGGTGTCAATGTAAAGATGATCACTGGTGACCAGCTAGCCATTGGCAAGGAGACCGGTCGCAGGCTTGGCATGGGAACCAACATGTACCCGTCTTCTTCCCTCCTTGGACAGAGCAAGGATCATAGCATTGCAGACCTCCCCATTGACGAGCTCATTGAAAAAGCTGACGGCTTTGCTGGTGTCTTCCCTGAGCACAAATACGAAATAGTGAAGAGGCTGCAAGACAAGAAGCACATATGTGGGATGACCGGAGATGGTGTGAATGATGCCCCAGCTCTAAAGAGGGCAGACATCGGCATTGCTGTAGCTGATGCAACTGATGCAGCCAGAAGTGCATCTGATATAGTCCTTACCGAGCCAGGACTGAGTGTGATTGTGAGTGCTGTACTGACCAGCAGAGCCATTTTCCAGAGAATGAAGAATTACACCATCTATGCAGTTTCCATAACCATCCGAATCGTGCTGGGGTTCGCGCTCATCGCTCTTATCTGGAAATTCGACTTCTCACCCTTCATGGTCCTCATCATAGCCATACTTAATGATGGAACCATCATGACCATTGCTAAAGACAGGGTGAAACCATCTCCTCTTCCTGACTCCTGGAAGCTCAGGGAGATCTTTGCCACTGGCATAGTCCTTGGCACCTACCTAGCTGTCATGACTGTTGTTTTCTTCTGGGCTGCTCACGACTCTAACTTCTTCTCAGATAAATTTTCAGTAAGATCAATCAGGGGAAACAAGCATGAGCTGACAGCAGTTGTGTACCTCCAAGTGAGTATCGTGAGTCAGGCACTCATCTTTGTTACTCGATCTCAGGGCTGGTCTTTCATTGAACGCCCCGGTCTCCTGCTAGTGAGTGCCTTCCTAATAGCACAGTTGGTGGCTACATTCATTGCTGTATATGCAAACTGGGGCTTTGCAAAGATCAAAGGTTGTGGATGGGGATGGGCTGGTGTCATCTGGCTTTACAGTATCGTCTTCTACTTTCCTCTAGATATTCTCAAGTTCTTTATTCGGTATGCATTGACTGGCAAGGCCTGGGACACACTCCTCCAGAATAAGACTGCCTTCACAACAAAGAAGGATTATGGAAGAGGAGAGAGGGAGGCACAATGGGCTTTGGCTCAGCGCACACTGCATGGCCTCCAGCCTCCACAGACATCCGAGCTCTTTACTGAAAAGGGCAACTACAGGGAGCTGTCTGAAATGGCTGAACAGGCCAAGAGGCGTGCTGAAGTTGCAAGGTTAAGGGAGCTTCACACATTGAAAGGGCATGTTGAGTCAGTGGTGAAGCTGAAGGGACTTGACATCGAGGGCATTCAACAGCACTACACTGTTTGA 2877 0.4845 MADILEEIKNETVDLERIPVEEVFEQLKCTRDGLTTEEGEKRLQIFGPNKLEEKEANSLCSRAESKLLKFLGFMWNPLSWVMEAAAIMAIVLANGGGEDPDWQDFVGIVVLLFINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGRWSEQEAEILVPGDVISIKLGDIIPADARLLEGDPLKIDQAALTGESLPVTRNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDNTNHQGHFQKVLTAIGNFCICSIALGIIVEIVVMYPIQRRKYRDGINNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSKQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMIEIFSKDVDSDMVILLAARASRVENQDAIDACIVGMLADPSEARSGITEVHFLPFNPVEKRTAITYIDSDGNWHRASKGAPEQIIELCNLKDHAKKKAHAIIDKFADRGLRSLAVSQQTVPEKNKESAGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDHSIADLPIDELIEKADGFAGVFPEHKYEIVKRLQDKKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFALIALIWKFDFSPFMVLIIAILNDGTIMTIAKDRVKPSPLPDSWKLREIFATGIVLGTYLAVMTVVFFWAAHDSNFFSDKFSVRSIRGNKHELTAVVYLQVSIVSQALIFVTRSQGWSFIERPGLLLVSAFLIAQLVATFIAVYANWGFAKIKGCGWGWAGVIWLYSIVFYFPLDILKFFIRYALTGKAWDTLLQNKTAFTTKKDYGRGEREAQWALAQRTLHGLQPPQTSELFTEKGNYRELSEMAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIEGIQQHYTV* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0207 958 NCBIfam plasma-membrane proton-efflux P-type ATPase 33 813 IPR006534 GO:0008553|GO:0016020|GO:0120029
Vvi9g0207 958 NCBIfam HAD-IC family P-type ATPase 108 357 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi9g0207 958 NCBIfam HAD-IC family P-type ATPase 570 683 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi9g0207 958 PRINTS P-type cation-transporting ATPase superfamily signature 186 200 - -
Vvi9g0207 958 PRINTS P-type cation-transporting ATPase superfamily signature 512 522 - -
Vvi9g0207 958 PRINTS P-type cation-transporting ATPase superfamily signature 595 614 - -
Vvi9g0207 958 PRINTS P-type cation-transporting ATPase superfamily signature 490 501 - -
Vvi9g0207 958 PRINTS P-type cation-transporting ATPase superfamily signature 618 630 - -
Vvi9g0207 958 PRINTS P-type cation-transporting ATPase superfamily signature 336 350 - -
Vvi9g0207 958 Gene3D - 348 495 IPR023299 GO:0000166
Vvi9g0207 958 FunFam Plasma membrane ATPase 488 643 - -
Vvi9g0207 958 PANTHER CALCIUM-TRANSPORTING ATPASE 16 890 - -
Vvi9g0207 958 Pfam haloacid dehalogenase-like hydrolase 332 609 - -
Vvi9g0207 958 SUPERFAMILY Calcium ATPase, transduction domain A 139 236 IPR008250 -
Vvi9g0207 958 Pfam Cation transporter/ATPase, N-terminus 18 88 IPR004014 -
Vvi9g0207 958 Gene3D - 101 822 - -
Vvi9g0207 958 FunFam Plasma membrane ATPase 348 495 - -
Vvi9g0207 958 ProSitePatterns E1-E2 ATPases phosphorylation site. 338 344 IPR018303 -
Vvi9g0207 958 PRINTS H+-transporting ATPase (proton pump) signature 767 788 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi9g0207 958 PRINTS H+-transporting ATPase (proton pump) signature 452 470 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi9g0207 958 PRINTS H+-transporting ATPase (proton pump) signature 567 583 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi9g0207 958 PRINTS H+-transporting ATPase (proton pump) signature 595 611 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi9g0207 958 PRINTS H+-transporting ATPase (proton pump) signature 626 651 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi9g0207 958 Gene3D - 907 958 - -
Vvi9g0207 958 Gene3D - 333 632 IPR023214 -
Vvi9g0207 958 SFLD Haloacid Dehalogenase 318 647 - -
Vvi9g0207 958 SFLD p-type atpase 318 647 IPR044492 -
Vvi9g0207 958 Pfam E1-E2 ATPase 138 316 - -
Vvi9g0207 958 FunFam Plasma membrane ATPase 139 223 - -
Vvi9g0207 958 SUPERFAMILY HAD-like 332 642 IPR036412 -
Vvi9g0207 958 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 853 IPR023298 -
Vvi9g0207 958 FunFam ATPase 4 plasma membrane-type 585 822 - -
Vvi9g0207 958 CDD P-type_ATPase_H 33 848 IPR006534 GO:0008553|GO:0016020|GO:0120029
Vvi9g0207 958 Gene3D - 139 223 - -
Vvi9g0207 958 SMART Cation_ATPase_N_a_2 14 94 IPR004014 -
Vvi9g0207 958 Coils Coil 909 929 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0207 Vvi-Chr9 2070067 2075775 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0207 6 958 Primary Pumps ATPases AT3G42640 82.791 0.0 1622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0207 K01535 - vvi:100249749 1810.04