Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0178 ATGCAAATCCCATCAATTTGTATAAAAAGTGTAAAGAAGAAGAAAGTGGATCAACTCCAGGATTCAGTGCAGAGGCTTGAAGAGAAGCTTTCTAATTTAGAATCAGAGAATCAAGTACTTCGTCAACAGGCACTGGCCATATCACCAACTGCTAAAGCTTTATCTGCACGACCAAAAACACCAATTCTTCAGAGAACTCCTGAGAATGGAAATGTTCTAAATGGAGAAGCAAAGAAACAATTGGATTCAAGTCTTGCCCTTTCTTCTCCACAGGAACCTGTATCTGAGGAAAAGCCCCAGAAATCTCTCAATGAGAAGCAGCAGGAAAACCAAGACCTGCTAATCAAGTGTATTTCACAAGATCTAGGATTCTCTGGGGGCAGGCCTATTGCTGCTTGCCTGATTTACAAATCCCTTCTCCAATGGAGGTCATTTGAGGTTGAAAGAACCAGTGTATTTGATCGTATCATTCAGAAAATAGGTGCAGCAATAGAGGTCAAGGATAACGATGATGTCTTGTCCTATTGGTTATGTAATTCGTCTACACTGCTGTTGCTTCTTCAACGCACACTCAAAGCAAGTGGAGCAGCTAGCTTAACTCCACAAATTAAAATTTATTTGAAAATTTAA 630 0.4 MQIPSICIKSVKKKKVDQLQDSVQRLEEKLSNLESENQVLRQQALAISPTAKALSARPKTPILQRTPENGNVLNGEAKKQLDSSLALSSPQEPVSEEKPQKSLNEKQQENQDLLIKCISQDLGFSGGRPIAACLIYKSLLQWRSFEVERTSVFDRIIQKIGAAIEVKDNDDVLSYWLCNSSTLLLLLQRTLKASGAASLTPQIKIYLKI* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0178 209 MobiDBLite consensus disorder prediction 84 105 - -
Vvi9g0178 209 ProSiteProfiles Dilute domain profile. 154 209 IPR002710 -
Vvi9g0178 209 Coils Coil 9 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0178 Vvi-Chr9 1779544 1784569 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0178 14 202 Myosins gene family AT5G20490 73.016 9.71e-85 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0178 K10357 - vvi:100266890 342.428