Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0177 ATGGAAATTGGGCTTCGTGCATCTCCCAAAAGTGCTGGGTTCTCATTTTTTAATGGTCAAGTGTTTGGTGGACTGGATGACTTGAGACAAGTTGAAGCCAAATATCCAGCTTTGCTTTTTAAACAGCAACTCACAGCCTCCCTTGATAAGATATATGGAATGATAAGAGACAATTTAAAGAAAGAGATTTCCCCATTGCTTGGATTGTGTATTCAGCACACACCATCTCAGATATTTTCATTCATCAATGTTCAGTTATTCAACAGTTTTCTTTTGAGGCGTGAATTTTGCTCATTCAGCAATGGGGAGTTTGTGAAGACAGGATTGGCTGAGTTAGAAAACTGGTTCCATGAAGCAACCGAAGAGTATGCTGGCTCAGCTTGGGATGAACTGAGGCATATCAGACAAGCAGGTTTAACTCATTAA 426 0.4014 MEIGLRASPKSAGFSFFNGQVFGGLDDLRQVEAKYPALLFKQQLTASLDKIYGMIRDNLKKEISPLLGLCIQHTPSQIFSFINVQLFNSFLLRREFCSFSNGEFVKTGLAELENWFHEATEEYAGSAWDELRHIRQAGLTH* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0177 141 ProSiteProfiles Dilute domain profile. 19 141 IPR002710 -
Vvi9g0177 141 PANTHER DILUTE DOMAIN-CONTAINING PROTEIN YPR089W 76 137 - -
Vvi9g0177 141 Pfam DIL domain 76 137 IPR002710 -
Vvi9g0177 141 SMART DIL_2 73 140 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0177 Vvi-Chr9 1771065 1772450 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0177 1 137 Myosins gene family AT5G20490 57.368 4.43e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0177 K10357 - vvi:100266890 222.246