Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0159 ATGGATCAACGAACCTCTCAAAACGACAACGACAATCGTCGTTTGTACAACCCCTATCAAGACCTCCAAATCCCAATCCAAAATATCTACAAACTTCCCACGTCGCCGGAGTTCCTCTTCCAGGAAGAGTCCGTTGCCCAACGCCGTTCCTGGGGTGAAAACCTCACCTACTACACAGGCATCGGCTACCTTTCCGGCGCACTCTCCGGCGCCGCCAAGGGCCTAGTCGACGGTGTCAAAGCGTCGGAGCCCGGGGACACTGTGAAACTGCGGATCAACCGGATCCTCAACGCCTCCGGCCACGCGGGAAGAAAATTCGGGAACCGGGCCGGCGTGATCGGGTTGATGTACGCGGGTTTGGAGAGCGGGATTGTGGCGGTGAGGGACACCGACGATGTGGTTAACAGCGTGGTGGCGGGTCTGGGCACCGGCGCGCTGTATCGGGCGGCGGCTGGGGTGAGGTCGGCGGCGGTAGCGGGGGCGATCGGTGGGGTGGTGGTTGGGGCAGCGGTGACGGCGAAGCAGGTGTTGAAGCGATACGTGCCGATCTAG 552 0.6123 MDQRTSQNDNDNRRLYNPYQDLQIPIQNIYKLPTSPEFLFQEESVAQRRSWGENLTYYTGIGYLSGALSGAAKGLVDGVKASEPGDTVKLRINRILNASGHAGRKFGNRAGVIGLMYAGLESGIVAVRDTDDVVNSVVAGLGTGALYRAAAGVRSAAVAGAIGGVVVGAAVTAKQVLKRYVPI* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0159 183 PANTHER TIM23 23 178 IPR045238 GO:0022857
Vvi9g0159 183 Pfam Tim17/Tim22/Tim23/Pmp24 family 56 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0159 Vvi-Chr9 1618572 1619123 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0159 4 179 Chloroplast and Mitochondria Gene Families AT1G17530 66.480 5.44e-76 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0159 K17794 - vvi:100246267 326.635