Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0151 ATGACACGGGGTAGGATAAGGGCAAAGCTCAGGCAAAGCCATCTTTATACATTCACATGTTTCCGACAAGGTACTGCCGATGCGGAGGCGCCGCATTCATTCGATGGGCCTGGATTCTCACGAATTGTGTATTGTAACCAACCTCAAGTTCACAGCAAGAAGCCCTTGTATTATACCTCAAATAATATATCAACCACAAAATATAATATCATTACCTTTCTGCCCAAGGCTATCTTTGAGCAGTTTCGAAGGGTAGCCAATTTGTACTTTCTTTTGGCTGCAATTTTGTCGCTCACACCAGTTGCGCCGTTCTCTGCTGTGAGCATGATTGCTCCTCTGGCATTTGTTGTTGGGCTTAGTATGGCAAAGGAAGCCTTGGAAGATTGGCGTAGGTTTATTCAGGATATGAAAGTTAACACCCGGAAAGCTAGCATTCATAAAGGGAATGGTGTATTTGGTTTTAAGCCATGGCAGAGGATTCGTGTTGGGGATGTGGTGAAAGTGGAGAAAGATCAATTTTTTCCTGCAGATTTGCTTTTGTTGTCATCGAGTTATGATGATGGGATTTGCTATGTGGAGACCATGAACCTGGATGGCGAGACAAACTTGAAGGTAAAGAGGTCTTTGGAGGTTACTTTGCCATTGGACGATGATGGGACTTTCAATGATTTCAGAGCAACGATAAAATGTGAAGATCCTAACCCGAGCCTCTACACCTTTGTTGGCAATTTTGAGTATGAGCGTCAGGTTTATCCTCTTGATCCTAGTCAGATCCTCCTCAGAGATTCAAAGCTTAGGAACACGGCTTTTGTGTATGGAGTGGTGATATTTACTGGTCATGATAGCAAAGTCATGCAGAATGCAACACAGTCCCCTTCAAAAAGGAGCAGAATAGAAAGAAAAATGGATCAAATCATTTACATTCTTTTCACCCTCCTTGTGGTGATCTCATTGATCAGCTCTATTGGATTTGCTGTAAAGACAAAGTACCAAATGCCCGACTGGTGGTACTTACAGCCCAATAATACCACAAACCTTTATAATCCCAAGAAGCCAGCATTGTCAGGAATTTTCCATCTTGTCACTGCTCTTATACTTTATGGGTATTTAATACCCATCTCACTCTATGTTTCAATTGAAGTTGTGAAGGTCCTGCAAGCAACATTCATTAACCAGGACATACACATGTATGATGAGGAAACTGGGAATACTGCCCAAGCACGGACATCAAATTTGAATGAGGAGCTAGGCCAGGTTGACACAATCCTTTCTGATAAAACTGGCACTCTGACATGCAATCAGATGGATTTTCTCAAGTGTTCGATTGCTGGTTCTGCATATGGTTCTGGTTCTAGTGAAGTTGAACTTGCTGCTGCAAAGCAGATGGCTATTGACCTTGAGGAGCAGGGAAATGAACTTTCCAATTTTCCCATGCATAAAAACAGTACTGGTGATTCATGGAATAATGCAAGTGGTTTAGAAGCAACAGAAATTGAACTGGAGACTGTCGTGACTTCCAAAGATGAGAAGGAACATAAACATGTGATCAAGGGGTTTAGCTTCGAGGACATCCGTCTCATGGGAGGAAATTGGTCAAAAGAGCCCAATGCAGATGTCATTGAATTATTTCTTCGGATACTTGCAGTTTGTCATACTGCAATTCCTGAGCGAAATGAAGAGATTGGGGGCTTTAATTATGAAGCAGAGTCACCAGATGAAGGAAGTTTTCTTGTTGCAGCTCGAGAATTTGGTTTTGAGTTTTGTAAAAGAACGCACACAAGTGTACATGTTCGTGAAAGATATGTTTCTTCTGGACAACCAGTCGAAAGGGAATACCAAATTCTCAATCTGTTGGAGTTCACTAGCAAAAGAAAGCGAATGTCTGTGATTGTGCGGGATGAGGATGGGCAGATTTTTCTCCTTTGCAAGGGTGCAGACAGCATCATCTTTGATCGTTTGGCAAAGAATGGAAGGATGTATGAGGAAGCTACTACTAGGCATCTGAATGAATATGGAGAATCTGGGTTGCGAACATTGGCGCTTGCTTACAAAAAGCTTGAAGAGTCTGAGTATTCTGCTTGGAATAGTGAATTTATGAAAGCAAAAACTTCTATCGGGCCTGATAGAGATGCAATGCTTGAAAGGGTATCAGATGCGATGGAAAGGGAGTTGATCCTTGTTGGTGCAACAGCTGTAGAGGACAAATTGCAAAAAGGGGTGCCTCAGTGCATAGATAAACTGGCACAAGCAGGTCTCAAGCTCTGGGTTCTAACAGGGGATAAGATGGAAACTGCTATCAACATAGGATTTGCATGTAGTTTGCTTCGACAGGGCATGAAGCAGATCTGCATAACTGTGAATCCAGATGTGCAAACCCAAGATGGCAAAGAGGCTGTCAAAGAGAACATTTTGATGCAAATTACCAATGCCTCTCAAATGATCAAGCTAGAAAAAGATCCGCATGCTGCTTTTGCGTTAATTATTGATGGGAAAACTCTAGAACACGCTCTAGCAGATGATATGAAGCATCAATTCCTGGGGCTAGCAGTTGACTGTGCATCTGTCATATGCTGTCGAGTATCTCCTAAGCAAAAGGCATTGGTAACGAGATTAGTAAAAGAAGGAACTGGAAAAACAACTTTAGCAATTGGTGATGGAGCGAATGACGTTGGAATGATTCAAGAAGCTGACATTGGTGTTGGCATCAGTGGGGTGGAAGGTATGCAGGCTGTGATGGCTAGTGACTTCTCGATAGCTCAGTTCCGCTTTTTGGAGAGACTTCTGGTTGTCCATGGCCATTGGTGTTACAAGAGGATTGCTCAGATGATATGCTATTTCTTCTACAAAAATATAGCTTTTGGCCTCACTCTCTTCTACTTTGAGGCATTCACAGGATTTTCTGGGCAATCAGTCTATGACGATTGGTACATGCTACTATTCAATGTTATCCTTACCTCATTGCCTGTCATTTCTCTAGGGGTTTTTGAACAAGACGTTTCTTCTGAAGTTTGTTTACAGTTTCCAGCACTGTATCAACAAGGACCCAGAAACTTGTTCTTCGACTGGTATAGGATATTTGGGTGGATGGGAAATGGTCTCTACACCTCCCTCATCATTTTCTTCCTCAACATTATCATCTTCTATGACCAGGCCTTCCGCTCTGCTGGCCAAACTGCTGATATGTCTGCAGTAGGCACCACAATGTTCACTTGTATCATATGCGCTGTCAACTGTCAGATTGCCCTCACAATGAGCCACTTCACATGGATCCAACATCTCTTTGTCTGGGGCAGCATCACCACTTGGTACATCTTTCTCCTACTCTATGGCATGACATCTCCATTATTTTCTGGGACTGCGTACCAAATCCTCGTAGAAGCTCTTGCACCTGCACCAATGTACTGGTGTGCCACTCTCTTAGTAATAGTCACCTGCAATCTCCCTTACCTAGTCCACATATCCTTCCAAAGATCTTTCAACCCCATGGATCACCATATCATCCAAGAGATCAAGTACTACAGGAAAGACGTCGAGGATCAATACATGTGGACTAGGGAGCGGTCTAAAGCCAGACAGGAGACCAAGATCGGATTCTCAGCAAGAGTCGACGCAAAGATCAGGCAGTTGAGGGGGAAGCTGCAAAAGAAGCATTCACCCACAGCCACAAATGTTCAGACACCCTTGTCATAG 3690 0.4309 MTRGRIRAKLRQSHLYTFTCFRQGTADAEAPHSFDGPGFSRIVYCNQPQVHSKKPLYYTSNNISTTKYNIITFLPKAIFEQFRRVANLYFLLAAILSLTPVAPFSAVSMIAPLAFVVGLSMAKEALEDWRRFIQDMKVNTRKASIHKGNGVFGFKPWQRIRVGDVVKVEKDQFFPADLLLLSSSYDDGICYVETMNLDGETNLKVKRSLEVTLPLDDDGTFNDFRATIKCEDPNPSLYTFVGNFEYERQVYPLDPSQILLRDSKLRNTAFVYGVVIFTGHDSKVMQNATQSPSKRSRIERKMDQIIYILFTLLVVISLISSIGFAVKTKYQMPDWWYLQPNNTTNLYNPKKPALSGIFHLVTALILYGYLIPISLYVSIEVVKVLQATFINQDIHMYDEETGNTAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGSAYGSGSSEVELAAAKQMAIDLEEQGNELSNFPMHKNSTGDSWNNASGLEATEIELETVVTSKDEKEHKHVIKGFSFEDIRLMGGNWSKEPNADVIELFLRILAVCHTAIPERNEEIGGFNYEAESPDEGSFLVAAREFGFEFCKRTHTSVHVRERYVSSGQPVEREYQILNLLEFTSKRKRMSVIVRDEDGQIFLLCKGADSIIFDRLAKNGRMYEEATTRHLNEYGESGLRTLALAYKKLEESEYSAWNSEFMKAKTSIGPDRDAMLERVSDAMERELILVGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMKQICITVNPDVQTQDGKEAVKENILMQITNASQMIKLEKDPHAAFALIIDGKTLEHALADDMKHQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSVYDDWYMLLFNVILTSLPVISLGVFEQDVSSEVCLQFPALYQQGPRNLFFDWYRIFGWMGNGLYTSLIIFFLNIIIFYDQAFRSAGQTADMSAVGTTMFTCIICAVNCQIALTMSHFTWIQHLFVWGSITTWYIFLLLYGMTSPLFSGTAYQILVEALAPAPMYWCATLLVIVTCNLPYLVHISFQRSFNPMDHHIIQEIKYYRKDVEDQYMWTRERSKARQETKIGFSARVDAKIRQLRGKLQKKHSPTATNVQTPLS* 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0151 1229 FunFam Phospholipid-transporting ATPase 119 289 - -
Vvi9g0151 1229 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 33 1185 - -
Vvi9g0151 1229 FunFam Phospholipid-transporting ATPase 727 923 - -
Vvi9g0151 1229 Pfam Phospholipid-translocating P-type ATPase C-terminal 911 1161 IPR032630 -
Vvi9g0151 1229 SFLD p-type atpase 407 934 IPR044492 -
Vvi9g0151 1229 SUPERFAMILY Calcium ATPase, transduction domain A 148 288 IPR008250 -
Vvi9g0151 1229 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Vvi9g0151 1229 Pfam Cation transport ATPase (P-type) 549 653 - -
Vvi9g0151 1229 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 1156 IPR023298 -
Vvi9g0151 1229 NCBIfam HAD-IC family P-type ATPase 855 964 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi9g0151 1229 Gene3D - 420 432 IPR023214 -
Vvi9g0151 1229 Gene3D - 120 290 - -
Vvi9g0151 1229 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Vvi9g0151 1229 SUPERFAMILY HAD-like 411 927 IPR036412 -
Vvi9g0151 1229 NCBIfam phospholipid-translocating P-type ATPase 58 1169 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vvi9g0151 1229 Gene3D - 726 923 IPR023214 -
Vvi9g0151 1229 SFLD Haloacid Dehalogenase 407 934 - -
Vvi9g0151 1229 CDD P-type_ATPase_APLT_Dnf-like 60 1036 - -
Vvi9g0151 1229 FunFam Phospholipid-transporting ATPase 594 725 - -
Vvi9g0151 1229 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 526 689 IPR023299 GO:0000166
Vvi9g0151 1229 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Vvi9g0151 1229 PRINTS P-type cation-transporting ATPase superfamily signature 883 902 - -
Vvi9g0151 1229 Gene3D - 592 725 IPR023299 GO:0000166
Vvi9g0151 1229 Gene3D - 433 457 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0151 Vvi-Chr9 1553195 1558610 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0151 1 1218 Primary Pumps ATPases AT1G17500 74.815 0.0 1916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0151 K01530 - vvi:100249823 2437.91